EST details — SGN-E377788

Search information 
Request: 377788Match: SGN-E377788
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C175589Clone name: TUS-21-L19
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C175589 is on microarray TOM1 spot ID 1-1-6.4.13.20 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C15543 [cLED-13-D6] Trace: SGN-T51902 EST: SGN-E236624 Direction: 5' Facility: TIGR
Clone: SGN-C175589 [TUS-21-L19] Trace: SGN-T190551 EST: SGN-E377789 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E377788Length: 749 bp (900 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E377788 [] (trimmed) AAGTTAAAAAAACATGTCATTCAAAAAAATGTACAATGTGCGATGAAAATTTCTACTTTCTGTTACGAAATTTTGAAGTAGGATAATTGGTGGTG
TCCATAACTTGTTCTTTATGAGTTCGAGGTCCACCCTTCTTTCAAGATTCATCTACGGATTACTTTTCTTTCTCTTTTCTCTTCTTCTCGATTTC
CTTTGGCTCTTTGTTTTGTTTTTTTTTTCATTTTGATTTTTCTGTTCTAGATTTTTCTTTTGTAGATGAAGGTTGAGTTTGTATTTGAGACAAAA
TGTTGAAAGATGGAGCATGAAATTCCTCAGATCTTGCTTCATCGTTCAACCTTCTACTTTTACGCGGGGTTTCATTGCCTCTCTTCGATATTATA
CAGATTTTTGAGTGCAAATTTGAAAGATTATTGACCAAAACAGTAGATTTTGGTGAAGAAGAATGTTAATGTTGTAGATTTTTCAGCAAAACAGC
TAATGTTGGTGAAGATTAATGTTAGGCGTGCGAAATAAAGAAGATTTGGTGAGGATTTAGGGAAGAACAACATATTTGGGGAAGATGAATTTTTT
TTTTATAAATATAGCGTGTGACGGTTTTAAAAAAAACTGGTATTGGTTTAGATAGTGGTGGATAGTTATTATAGAATGATAAAATCCCTAAGTAT
TTTGTAATTTTTTTAAAGGTAACTTTATAATGTTTAATTAATTTATAATAGTTAAAGAGTTTTGTTTAAAAAAGGGAACTTAAA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E377788] SGN-U568194 Tomato 200607 Build 2 68 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T190550 [Download][View] Facility Assigned ID: FA0AAD9CF10FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read -- flanking 5' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.906 Expected Error Rate: 0.0093 Quality Trim Threshold: 12.5