EST details — SGN-E377853

Search information 
Request: 377853Match: SGN-E377853
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C175591Clone name: TUS-21-L21
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C175591 is on microarray TOM1 spot ID 1-1-4.4.13.20 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C15552 [cLED-13-E16] Trace: SGN-T51835 EST: SGN-E236557 Direction: 5' Facility: TIGR
Clone: SGN-C175591 [TUS-21-L21] Trace: SGN-T190614 EST: SGN-E377852 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E377853Length: 696 bp (891 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E377853 [] (trimmed) CAGGCAAGGCTGGCAAAAGGGGCAATGGCCATCCTATTCTTCAAGGCTCTTCCCCTGCTTCTTCTTCTTTCTTTTACAGATTTATTTGCAAGCAC
ACTCAGCCTTGGAATTGGAATTAACTATGGCCAAATTGCAAACAATTTGCCAACACCCTCACGAGTCTCGTTTCTCCTCAGATCACTCAATGTTA
CGAGAGTAAAACTCTATGACGCTGATCCAAACGTGTTAACCGCTTTCGCTAACACGAATGTTGAATTTGTTATCGGACTTGGGAATGAGTACCTA
CAAAGAATGTCTGATCCTCAACAAGCTCAGGCTTGGATTCAACAACATGTTCAACCTTACCATACTCAGACTAAAATCACTTGTATTACTGTTGG
TAATGAGGTCTTGACAGGTACTGATACGCAGCTGAAGTCTTACCTCCTACCAGCAATGCAGGGTGTGTACCGTGCTCTTGTTAATCTTGGACTTA
GTAATGAAATATATGTGGCACATCCCCACTCGGCGGGGATCTTGGAGAACTCTTTTCCGCCTTCTTCTTGTTCATTTCGACAAGATCTTAGTGAA
TACATTCATGGCATGCTCAATTTCCATGTCCAAACTAAGTCGCCGTTCCTTATAAATTTCTATCCATTCTTTGCATACAAAGACAAACCCAACGA
AGTTCCGCTTGATTATGTACTTTTTCAGCCT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E377853] SGN-U585972 Tomato 200607 Build 2 57 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T190615 [Download][View] Facility Assigned ID: FA0AAD9CF11RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.975 Expected Error Rate: 0.0026 Quality Trim Threshold: 14.5