EST details — SGN-E377951

Search information 
Request: 377951Match: SGN-E377951
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C174966Clone name: TUS-20-B20
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C174966 is on microarray TOM1 spot ID 1-1-5.2.13.6 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C23802 [cLED-6-G15] Trace: SGN-T50115 EST: SGN-E233129 Direction: 5' Facility: TIGR
Clone: SGN-C174966 [TUS-20-B20] Trace: SGN-T190174 EST: SGN-E377952 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E377951Length: 733 bp (911 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E377951 [] (trimmed) ACTGCAAGTTTTTACACATTATTATCAATTAAAACAATACAAGATGGAATACAAGAAAACAAAGGGGAAGAAAAGGAAAAAAACAATTCTTTTAC
GACACGATACATAATTCAAAAGTCAAACTTTTTAATTTTGACCATCAATTTGGACATATAACAGAATAGTTTAACTTTCAAAATTCAAAAGATGT
CTCATAAACTGAGACAGACTAAATCTTGTTAGTCATATGGTGTAGCCACCAAATACAAGTTGTTTTTCATTGTAGCAGCAGCACCAAAACCTTCA
GTCATATCTAAATCTTGTGGATTCATACCATTAGGAAGTGTCCAATCGAAATGATAAAGTAATCTAGCCAATGTGAGTTCACTACTTGCCGTAGC
AAATAACATTCCTGGACAAACCCTTTTTCCAAATCCAAATGCCAAAAACTCCATAGGAACATTGGATGATCCTTTGATCATTTTAACATCATTAT
CGACATAATTGTTGAATCGATCAGGCATGAATTTCTCTGGATCGTGCCAATATTCAGGATCTCTTCCCATTGCATACAAATTCATCAAGGCTATT
GTTTTATTAGGTATAACATACCCATTAATCGCGATTTCCTCTATTGATTCTCTTGGTATAGCTAAGGGACCTGGAGGATGAAGTCTTAGAGTTTC
TTTCACAATCAATTTCAAGTATTTCAAATTTTGTACATCGATATGATCAACTTTCTTTTTTCCTTTTA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E377951] SGN-U585201 Tomato 200607 Build 2 5 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T190173 [Download][View] Facility Assigned ID: FA0AAD8DA10FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.941 Expected Error Rate: 0.0063 Quality Trim Threshold: 14.5