EST details — SGN-E378049

Search information 
Request: 378049Match: SGN-E378049
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C175532Clone name: TUS-21-J10
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C175532 is on microarray TOM1 spot ID 1-1-7.2.13.16 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C15431 [cLED-11-O20] Trace: SGN-T51342 EST: SGN-E235332 Direction: 5' Facility: TIGR
Clone: SGN-C175532 [TUS-21-J10] Trace: SGN-T190662 EST: SGN-E378048 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E378049Length: 687 bp (941 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E378049 [] (trimmed) GCACCAGGGCTCCTCTCTTCACCTTCCAATTTGTTCGAAAGCAGTCAGATACAGTTTACAAAATGGTTCAAGAGGCGACTAATGGTGGTTCCGAG
AAGTCACAGTTGGCTATCACTGTAGAACAGCTCATTGCCGTTAACCCTTACAATCCAGATATCCTCCCTGATCTTGAAAACTATGTCAACGAACA
GGTTTTGTCTCAAACATACAATCTGGATGCAAACCTTTGCCTGCTCCGTCTTTATCAGTTTGAGCCGGACAGAATGAGTACACCAATTGTTGCTC
GTATTTTGGTTAAGGCCTTAATGGCAATGCCAGCTCCAGATTACAGCCTGTGTCTCTTCCTAATCCCCGAACGAGTGCAAATTGAAGAGCAATTC
AAGACACTAAATGTTCTGTCACACTTCTTAGAGACTGCAAGGTTCCGCCAATTTTGGGATGAAGCTGCAAAGAGCCGCCACATTGTGGAAGCTGT
TTCTGGTTTTGAACAAGCAATTCGAGCATATGCTGTTCATGTCCTTTCAATAACCTACCAGAAGGTTCCAAGGACCATTCTTGCGGAGGCTATCA
ACATTGAGGGTGTTTCATTGGATAAGTTTCTTGAGCACCAAGTATCGAACAACGGTTGGGTTGTTGAAAAAGGCCAGGGTAAGGGCCAACTCATC
ACCCTTCCTCCCACTGAATTTC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E378049] SGN-U584733 Tomato 200607 Build 2 30 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T190663 [Download][View] Facility Assigned ID: FA0AAD9DE05RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.981 Expected Error Rate: 0.0055 Quality Trim Threshold: 14.5