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EST details — SGN-E378082

Search information 
Request: 378082Match: SGN-E378082
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C175336Clone name: TUS-21-B6
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C175336 is on microarray TOM1 spot ID 1-1-3.2.13.10 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C24307 [cLED-7-M4] Trace: SGN-T50539 EST: SGN-E232030 Direction: 5' Facility: TIGR
Clone: SGN-C175336 [TUS-21-B6] Trace: SGN-T190634 EST: SGN-E378020 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E378082Length: 637 bp (935 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E378082 [] (trimmed) AGCGGGCAAGCAAAAGACAGTGTTCTTGATAGCTAAAGATTACATATATGGTGGAAACCAAGTGGATATTAAATGGTTACTTCTTATGGAATTCT
CTACGTATAGCATTTTAGTTGTAAAATCATATTCTGGAACTACTGCAAATCTAAACAAAACCTGATAATCAACACATATGCTTCACAAATCGGAC
ATCAGTCGCACATTTGTCTCTTCATGGTCATTCCCAATAAGCCATATTCAGTGTCCTCACCTTACAGAAAGAACTAGAAAAATTTCTTCCCAGAA
CGATTTTCATTGTCAGAGCGTGAATCACCAAATCCACTAGAGCGGCCTGAACCAAATCCTCCAAAACCACTTGAGCGGTTTGAACTCTCGAAGTT
TCCAAAGCCACCAGTCCGGTTTGAATTACCAAAACCGCCACTACGATCTGAACCACCAAAATTACCAAATCCTCCCTGGCGATTGGAGTCACGCA
TGTCCCCGGAACCACCAAAATTCCCTGAGCGACCTGAGCTTGATCCACCAAAGCTACCTCCTGATCGTCCAAAACCAGATCCACCAAATCCACCT
GTTCGACCAGAATATCCGCCTTGCCCCCCAAACCTGCCGCCAGAATTTCCATAGCCACCAGAGCGAC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E378082] SGN-U571933 Tomato 200607 Build 2 44 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T190696 [Download][View] Facility Assigned ID: FA0AAD9DA03FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read -- flanking 5' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.968 Expected Error Rate: 0.0025 Quality Trim Threshold: 12.5