EST details — SGN-E378082
Search information |
Request: 378082 | Match: SGN-E378082 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C175336 | Clone name: TUS-21-B6 |
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Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C175336 is on microarray TOM1 spot ID 1-1-3.2.13.10 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C24307 [cLED-7-M4] | Trace: SGN-T50539 | EST: SGN-E232030 | Direction: 5' | Facility: TIGR |
Clone: SGN-C175336 [TUS-21-B6] | Trace: SGN-T190634 | EST: SGN-E378020 | Direction: 5' | Facility: INRA |
Sequence |
Sequence Id: SGN-E378082 | Length: 637 bp (935 bp untrimmed) |
Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E378082 [] (trimmed)
AGCGGGCAAGCAAAAGACAGTGTTCTTGATAGCTAAAGATTACATATATGGTGGAAACCAAGTGGATATTAAATGGTTACTTCTTATGGAATTCT
CTACGTATAGCATTTTAGTTGTAAAATCATATTCTGGAACTACTGCAAATCTAAACAAAACCTGATAATCAACACATATGCTTCACAAATCGGAC
ATCAGTCGCACATTTGTCTCTTCATGGTCATTCCCAATAAGCCATATTCAGTGTCCTCACCTTACAGAAAGAACTAGAAAAATTTCTTCCCAGAA
CGATTTTCATTGTCAGAGCGTGAATCACCAAATCCACTAGAGCGGCCTGAACCAAATCCTCCAAAACCACTTGAGCGGTTTGAACTCTCGAAGTT
TCCAAAGCCACCAGTCCGGTTTGAATTACCAAAACCGCCACTACGATCTGAACCACCAAAATTACCAAATCCTCCCTGGCGATTGGAGTCACGCA
TGTCCCCGGAACCACCAAAATTCCCTGAGCGACCTGAGCTTGATCCACCAAAGCTACCTCCTGATCGTCCAAAACCAGATCCACCAAATCCACCT
GTTCGACCAGAATATCCGCCTTGCCCCCCAAACCTGCCGCCAGAATTTCCATAGCCACCAGAGCGAC
CTACGTATAGCATTTTAGTTGTAAAATCATATTCTGGAACTACTGCAAATCTAAACAAAACCTGATAATCAACACATATGCTTCACAAATCGGAC
ATCAGTCGCACATTTGTCTCTTCATGGTCATTCCCAATAAGCCATATTCAGTGTCCTCACCTTACAGAAAGAACTAGAAAAATTTCTTCCCAGAA
CGATTTTCATTGTCAGAGCGTGAATCACCAAATCCACTAGAGCGGCCTGAACCAAATCCTCCAAAACCACTTGAGCGGTTTGAACTCTCGAAGTT
TCCAAAGCCACCAGTCCGGTTTGAATTACCAAAACCGCCACTACGATCTGAACCACCAAAATTACCAAATCCTCCCTGGCGATTGGAGTCACGCA
TGTCCCCGGAACCACCAAAATTCCCTGAGCGACCTGAGCTTGATCCACCAAAGCTACCTCCTGATCGTCCAAAACCAGATCCACCAAATCCACCT
GTTCGACCAGAATATCCGCCTTGCCCCCCAAACCTGCCGCCAGAATTTCCATAGCCACCAGAGCGAC
Unigenes |
Current Unigene builds | |||||
[SGN-E378082] | SGN-U571933 | Tomato 200607 | Build 2 | 44 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T190696 [Download][View] | Facility Assigned ID: FA0AAD9DA03FM1 |
Submitter: Koni | Sequencing Facility: INRA |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.968 | Expected Error Rate: 0.0025 | Quality Trim Threshold: 12.5 |