EST details — SGN-E378103

Search information 
Request: 378103Match: SGN-E378103
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C175438Clone name: TUS-21-F12
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C175438 is on microarray TOM1 spot ID 1-1-5.2.13.15 [Order] [Tomato Microarray Database]
See unigene SGN-U578039 for alternative clones/ESTs which are mapped
Additional sequencing 
Clone: SGN-C15269 [cLED-11-G8] Trace: SGN-T51320 EST: SGN-E235310 Direction: 5' Facility: TIGR
Clone: SGN-C175438 [TUS-21-F12] Trace: SGN-T190716 EST: SGN-E378102 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E378103Length: 704 bp (958 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E378103 [] (trimmed) GGCACTGACCCTTCTTCATTCTCCCCTTAATTATCACATAAAAATTTTCCAAATTTCAAGATTCAATCAAAAAACCCCATTTCCCACTGCTTAAA
CAAACCCCACATAGTTTTTTTGTTTTCACAATTCTTGCACCTTAGAGAACTTAAGGGTTGAAAGTAAAATAAATATGGAAGTTGGAAGGGTTATT
AATGAAAAACTTTCTCATTGTCTCTGGATGTCCAATTCTTCCCCATCTTTTCATGGTTCTGTATCAATGGTTAATTTCGAAGATGTTGGTCGAGG
AGAAGTGTCTAAAGAGAGGTCATTTTTCCCAGGAATTGACAAAGAAGAAACTAGCAATGATGATTATGATAGCTGTTATCATCAGCCAGAGAAGA
AGAGAAGACTTTTGCCTAATCAAGTTCAGTTTCTTGAGAAGAGTTTTGAGGTAGATAACAAGCTTGAACCAGAGAGGAAAGTTCAATTGGCTAAT
GAACTTGGCTTGCAGCCTAGACAAATTGCTATTTGGTTTCAAAATAGGCGCGCTCGATACAAAACTAAAGTACTTGAGAAGGATTATGATGCTTT
GAAAGCTAGCTTTGATAAGCTTAAAGCTGATTATGACACCCTTTTCAAAGAGAACGAGGATTTGAGAAATGAGGTCCATTTGCTTACACAAAAAT
TGCATATAAGGGAGAAAGGAAAGGAAACTCAAAGCAAAG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E378103] SGN-U578039 Tomato 200607 Build 2 54 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T190717 [Download][View] Facility Assigned ID: FA0AAD9DC06RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.938 Expected Error Rate: 0.0044 Quality Trim Threshold: 14.5