EST details — SGN-E378107

Search information 
Request: 378107Match: SGN-E378107
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C175484Clone name: TUS-21-H10
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C175484 is on microarray TOM1 spot ID 1-1-7.4.13.15 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C15344 [cLED-11-K2] Trace: SGN-T51329 EST: SGN-E235319 Direction: 5' Facility: TIGR
Clone: SGN-C175484 [TUS-21-H10] Trace: SGN-T190722 EST: SGN-E378108 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E378107Length: 743 bp (952 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E378107 [] (trimmed) AATTAGAACTCCAACCACTTAGTTATCATTATACAGTGCCAATGACTGAGTAAAGTTCCAAACATTCCAGTTTCCAGGCAAAACAAGAGCATTCT
ACTAATGTTAACAGATAGCTTGTTCAAAGAATGGAAGCCAAAGCAATAAGCAGATGACGAAAATTTTGCAGATAACAGCCGGGCACAGTTTAATT
TCAAATCTCAGCAGCCAAACCACTAGTAAATCCATATTCCGGACAAAATTGAGAGGATCACTATAATCACCAACCAATTATCTAAAGTCCAAATT
AAGTTATTTTCAGAGGCCATAGGCACCAGAACTAGCTTGATTGTCCCACGACATATATTCACTCAATAACAGATCCTTACCTATCAAGATCACTA
AACAACCATGTGGTTTCTCATCCCGTGGTTTTTGACCCACCAAGGGTTTGCTTAGCCACATATATTTGTTTCACCTTAGTAGATGGAACCGCACC
CAAGGACTGATTTCTGCCATGGAAACCCATTCTGCGATGGGACCAATCATTTCCAGCCATATTTCTCTGAGACATTCCACCACCCCTGTGATAGT
TGTAGCCTGCAGAGGTATTCTTCTGCTGGGTCTGCGTTCTGAAACCACTGACACTTTGATCTTTACCACTGTTGCTGACACCATTTCTGAGAGCA
TCAATGTTGCCTGTTTCTGCATTAGCACATCCAGAGGAGCTTTGACTGGCCAAACTCTGAGCAGAACCACCAGTAACC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E378107] SGN-U568407 Tomato 200607 Build 2 17 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T190721 [Download][View] Facility Assigned ID: FA0AAD9DD05FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.963 Expected Error Rate: 0.0058 Quality Trim Threshold: 14.5