EST details — SGN-E378125

Search information 
Request: 378125Match: SGN-E378125
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C175572Clone name: TUS-21-L2
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C175572 is on microarray TOM1 spot ID 1-1-7.4.13.12 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C15507 [cLED-13-C16] Trace: SGN-T51830 EST: SGN-E236552 Direction: 5' Facility: TIGR
Clone: SGN-C175572 [TUS-21-L2] Trace: SGN-T190738 EST: SGN-E378124 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E378125Length: 704 bp (921 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E378125 [] (trimmed) GTTACCTACACTCTTCAAACATAGCAACTTTTCAAGCTTTGTTCGACAACTTAATACCTATGGTTTTCGTAAAATTACAACAAGTCAATGGGAGT
TCAGTAATGATAAGTTTAAAAAGGGCGAAAAGAATTTACTCCGTGAAATTCGCCGAAGAAAAGCATGGACAAATAGGCAACAACCAAACAACAAG
AAAGACAATATTATAGAAGAAGATCAAAGATCATCATCATCAACTTCATCATCATCTGAGTATATAAATCTTGTCGACGAAAATAAAAGGTTGAA
AATGGAAAATGGAGTCCTTAGCTCTGAGCTTTTACTCATGAAAAACAAGTGCAAAGAATTAATGAATATTGTTACAATATTTGCTAAAAATCCAG
AGAAAGAAGAAGATGAAAAAAAACCAATGTTATTTGGAGTAAGATTAGAAGTTAAAGAAGAAATGGAGAAGAAGAGAAAAAGAGTTGAACTTAAT
GAAATGGCTAGTGTTTTTCTCTCTCAATTATGCAAATAAAGTAGAAATTTAGAGAGAAAAAATCTATATGTAATAGTTGTACTATGCTATTTTGT
ATTATTTCATCCAAAAATTAATGGTCTTAATTAGCATGTAGTGACTACTAATTAAGTGGAGATATATACCTAAGTTGTATAAATTATGCAAGTTT
TATTTTCACGTGAAATGTTAATAAATCATTTGCTTTTCT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E378125] SGN-U568323 Tomato 200607 Build 2 10 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T190739 [Download][View] Facility Assigned ID: FA0AAD9DF01RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.904 Expected Error Rate: 0.0069 Quality Trim Threshold: 12.5