EST details — SGN-E378300

Search information 
Request: 378300Match: SGN-E378300
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C180582Clone name: TUS-34-L20
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C180582 is on microarray TOM1 spot ID 1-1-5.4.19.14 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C180582 [TUS-34-L20] Trace: SGN-T187258 EST: SGN-E375490 Direction: 3' Facility: INRA
Clone: SGN-C180582 [TUS-34-L20] Trace: SGN-T187259 EST: SGN-E375491 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E378300Length: 478 bp (1145 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E378300 [] (trimmed) AAGGAGTTTGATTTAACGGTAGTTCCTCCGAAGGNGAAATTGATGCACCATTATCGCCAAGGAAGAATTTATGTCTCAGTGTGGTGGAATCCGAT
ATAAAAAATGAAACGTCTTTTCAAAAACTTGACATGATTTTGACTCAATATTTAGAGACATTGTCAAAACGGAAGAGGTATCATATAGGTTATCC
AACAAACATGCATTATGAGCATCATGCCACTTTAGCCCCACTTTTGCAATTTCATTTGAACAATTTTGGAGACCCCTTTGCTCAGCACCCTACAG
ATTTTCATTCAAAAGATTTTGAAGTGGCTGTATTAGATTGGTTTGCACAACTCTGGGAAATAGAGAAAGATGAATATTGGGGATACATTACTAGT
GGTGGCACTGAGGGCAATCTCCATGGCCTTTTGGTTGGAAGAGAGCTACTTCCAAGTGGGATATTATATGCATCAAAAGATTCACATTACTCATT
TTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E378300] SGN-U578845 Tomato 200607 Build 2 253 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T1630 [Download][View] Facility Assigned ID: TUS34L20.ab1
Submitter: Koni Sequencing Facility: Giov. Lab
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: No vector sequence detected
Passed all screens and filters
Sequence Entropy: 0.965 Expected Error Rate: 0.0103 Quality Trim Threshold: 20.5