EST details — SGN-E378358
| Search information |
| Request: 378358 | Match: SGN-E378358 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C175011 | Clone name: TUS-20-D17 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C175011 is on microarray TOM1 spot ID 1-1-8.4.13.6 [Order] [Tomato Microarray Database]
See unigene SGN-U581008 for alternative clones/ESTs which are mapped
| Additional sequencing |
| Clone: SGN-C23852 [cLED-6-I17] | Trace: SGN-T50118 | EST: SGN-E233132 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C175011 [TUS-20-D17] | Trace: SGN-T190039 | EST: SGN-E377540 | Direction: 3' | Facility: INRA |
| Clone: SGN-C175011 [TUS-20-D17] | Trace: SGN-T190040 | EST: SGN-E377541 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E378358 | Length: 632 bp (1128 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E378358 [] (trimmed)
CAGGTAAGCTAAGAGAGAGAAAATGGTGTTGATTGATAAACTTTGGGATGATGTTATGGCTGGTCCCAGCCCTGATAAAGGACTCGGCAAACTCA
GAAAGAGCCTCACTATTCAAACTGGTGGTGAATCAGGAGAAGGATCTAGCAAGTACCAGAGATCTCTGTCGATGCCGGCAAGTCCGCCGACGCCA
GGTACGCCGGTGACGCCGACGAATATATCGCCGACGGTACGGAAAGAGAATGTGTGGAGGAGTGTTTTTCACCCAGGGAGCAATTTAGCTACCAG
GAGAATTGGTGCTGAAGTGTTTGATAAGCCTTCTCACCCTAACGCTCCTACTGTTTATGACTGGCTCTACAGTGGGAACACCAGATCTAAGCATC
ATGAGAAGTGCTGAGAGTTTTTGGGTGGAAAAAAGCAGTAGAAAATCTTCATGTAAATAGTGTTTTTTTTCCTATGCGAGTTGGGGACTTGCTAT
CTATATTTGTGATTATATGTTTTTTCTGTTGGGTATTAAGTTATAATTAAGTAGTATGCTGTATTGTAAATTACGCTTTCAAAAGCTAATTTCTT
AGCTTTAATGGCAGGCCATCTATGGCTTTCTAGTTCCAAATGAAGTTGTTACTATTATTACT
GAAAGAGCCTCACTATTCAAACTGGTGGTGAATCAGGAGAAGGATCTAGCAAGTACCAGAGATCTCTGTCGATGCCGGCAAGTCCGCCGACGCCA
GGTACGCCGGTGACGCCGACGAATATATCGCCGACGGTACGGAAAGAGAATGTGTGGAGGAGTGTTTTTCACCCAGGGAGCAATTTAGCTACCAG
GAGAATTGGTGCTGAAGTGTTTGATAAGCCTTCTCACCCTAACGCTCCTACTGTTTATGACTGGCTCTACAGTGGGAACACCAGATCTAAGCATC
ATGAGAAGTGCTGAGAGTTTTTGGGTGGAAAAAAGCAGTAGAAAATCTTCATGTAAATAGTGTTTTTTTTCCTATGCGAGTTGGGGACTTGCTAT
CTATATTTGTGATTATATGTTTTTTCTGTTGGGTATTAAGTTATAATTAAGTAGTATGCTGTATTGTAAATTACGCTTTCAAAAGCTAATTTCTT
AGCTTTAATGGCAGGCCATCTATGGCTTTCTAGTTCCAAATGAAGTTGTTACTATTATTACT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E378358] | SGN-U581008 | Tomato 200607 | Build 2 | 103 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T1339 [Download][View] | Facility Assigned ID: TUS20D17.ab1 |
| Submitter: Koni | Sequencing Facility: Giov. Lab |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.980 | Expected Error Rate: 0.0065 | Quality Trim Threshold: 12.5 |
Working
