EST details — SGN-E378362
| Search information |
| Request: 378362 | Match: SGN-E378362 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C175272 | Clone name: TUS-20-O14 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C175272 is on microarray TOM1 spot ID 1-1-3.3.13.5 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C24213 [cLED-7-I21] | Trace: SGN-T50320 | EST: SGN-E231811 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C175272 [TUS-20-O14] | Trace: SGN-T189874 | EST: SGN-E377663 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E378362 | Length: 824 bp (1157 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E378362 [] (trimmed)
AACCAGGGGTAATGGAGATTCCGATTCCCGCACCGGAAATGTCATGTCATCACCGGCGGCGTTTGTTAAGATTGCCGGAGATGGAACCGCCGATA
TGGTAGATCAAGCTGTATCAATGGCATTTGGACAAACAAGGAACAATAACTATGTAAGAATTCAAGGAAATGGTATTGTTGGGAAAAAATACCAA
TTAATTAAAGATGAAAATATGAACAAATGTGAAAAAATGAAAAAAATGGTGGTAATTGCTGAGGAAATGTTAGGGCAAAAAAATGTTGAATGTGT
ATTATTTCAAGGAAAGAAATTGGTTGAAAATTCAAATTTGGACAAATTAAAGACGATAGCAAGTGAACTGATCAAAGAACAAGAAAGGAGAAAAA
CTAGCATTTTGCCCCCTGTGGTTTTGAAACATGCATCACCATCCCCTAGAACATCGTCCGTGACAACCTTGTCCTCCGATTCATCGTGTTAAATC
CTAAAGTATTTGATGAAATAGTTAAGGTGTGAGCATACTAGTCTGAAAAAAAAAAAGAAGGACTAGTGATTAATAGAGTAGGGAAATGTGAGTCT
GAGTTTAGTTGAATCGAGTTTGGGTTGAGATAAATTAGACTTGAAATATGGGCGTGAAGCCACTCGTGATGAACTCAAACGTAACGTTTACTAGT
TCGATCGAGCTGAGCTGCTAAAATAGCCCAACATTTTTTTTTCCCATCCTTTTTTATTTTTGATTCATGGGGTTGGTTTGTAGTTGAAATGTATA
TTTAGGACCGAATCTTGATGATGAATGTTTATATGTATATGATTCTAGTAATATGAATGGATTG
TGGTAGATCAAGCTGTATCAATGGCATTTGGACAAACAAGGAACAATAACTATGTAAGAATTCAAGGAAATGGTATTGTTGGGAAAAAATACCAA
TTAATTAAAGATGAAAATATGAACAAATGTGAAAAAATGAAAAAAATGGTGGTAATTGCTGAGGAAATGTTAGGGCAAAAAAATGTTGAATGTGT
ATTATTTCAAGGAAAGAAATTGGTTGAAAATTCAAATTTGGACAAATTAAAGACGATAGCAAGTGAACTGATCAAAGAACAAGAAAGGAGAAAAA
CTAGCATTTTGCCCCCTGTGGTTTTGAAACATGCATCACCATCCCCTAGAACATCGTCCGTGACAACCTTGTCCTCCGATTCATCGTGTTAAATC
CTAAAGTATTTGATGAAATAGTTAAGGTGTGAGCATACTAGTCTGAAAAAAAAAAAGAAGGACTAGTGATTAATAGAGTAGGGAAATGTGAGTCT
GAGTTTAGTTGAATCGAGTTTGGGTTGAGATAAATTAGACTTGAAATATGGGCGTGAAGCCACTCGTGATGAACTCAAACGTAACGTTTACTAGT
TCGATCGAGCTGAGCTGCTAAAATAGCCCAACATTTTTTTTTCCCATCCTTTTTTATTTTTGATTCATGGGGTTGGTTTGTAGTTGAAATGTATA
TTTAGGACCGAATCTTGATGATGAATGTTTATATGTATATGATTCTAGTAATATGAATGGATTG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E378362] | SGN-U574204 | Tomato 200607 | Build 2 | 4 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T1358 [Download][View] | Facility Assigned ID: TUS20O14.ab1 |
| Submitter: Koni | Sequencing Facility: Giov. Lab |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.943 | Expected Error Rate: 0.0091 | Quality Trim Threshold: 12.5 |
Working
