EST details — SGN-E378483
| Search information |
| Request: 378483 | Match: SGN-E378483 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C185725 | Clone name: TUS-48-C3 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C185725 is on microarray TOM1 spot ID 1-1-6.3.7.4 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C185725 [TUS-48-C3] | Trace: SGN-T188230 | EST: SGN-E376190 | Direction: 3' | Facility: INRA |
| Clone: SGN-C185725 [TUS-48-C3] | Trace: SGN-T188231 | EST: SGN-E376191 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E378483 | Length: 276 bp (1107 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E378483 [] (trimmed)
AGGTACATGACCAAATTTTGGATTATACAGACAGTGACAATACATAAGGCTCAATTGTGCGCTCACTCTTTATTTTATTTCTTCCCTCGAAGTTT
CGCTCCAAGAGCTCTCTCCAGTTTTGAGATTATTTGTTGGTTTGGAATTGCCTTTCCTGATTCGTATTCTTGGATGATCTGTGGCTTCTCATTTA
TCAATTGAGCAAGTTGAGACTGAGTCAGCTTTTTGTCTTGTCGTGCTTGCATGATAGCTTTCTTCAGTTCAGTTGGTACCTGCCCG
CGCTCCAAGAGCTCTCTCCAGTTTTGAGATTATTTGTTGGTTTGGAATTGCCTTTCCTGATTCGTATTCTTGGATGATCTGTGGCTTCTCATTTA
TCAATTGAGCAAGTTGAGACTGAGTCAGCTTTTTGTCTTGTCGTGCTTGCATGATAGCTTTCTTCAGTTCAGTTGGTACCTGCCCG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E378483] | SGN-U563353 | Tomato 200607 | Build 2 | 34 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T1899 [Download][View] | Facility Assigned ID: TUS48C3.ab1 |
| Submitter: Koni | Sequencing Facility: Giov. Lab |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.000 | Expected Error Rate: 0.0000 | Quality Trim Threshold: 0 |
Working
