EST details — SGN-E378638

Search information 
Request: 378638Match: SGN-E378638
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C184908Clone name: TUS-46-A2
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C184908 is on microarray TOM1 spot ID 1-1-7.1.12.13 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C17276 [cLED-19-D11] Trace: SGN-T53603 EST: SGN-E237689 Direction: 5' Facility: TIGR
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Sequence 
Sequence Id: SGN-E378638Length: 455 bp (1227 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E378638 [] (trimmed) CTCTACTGGGCGTCGGTTTACAAGGAAATACCTTTGTATTCTTAAACCCAACAACTCCGGCAGCGAAAGTAGAGGAAAAAATTGTTCGGACAGAT
GAAACGACAACGTCGGAGAAGAAAAAGAAGGAGATCTCCGGCGAAGTGAAAGTCATCGGAAAAGTAACGAAGAAGATGAAGAAGGTTGTGAAGAA
GAGTGAAGGGGTTTTAGCTCATGAAGCTTATATGAAGAGTAAAGCTAAAGCTGAAGATCGCCGGCGATCGTATCTTCCTTATCGGCCGGAGCTCG
TCGGATTTTTCACAAATGTGAACGGTGGATTAACGAAGAATGTGCACCCATTCTAAGTCAATTTTTTTAAATTTAATTAATTTTAATATTATAGT
AATGTAATTTGCTTAGTCAATAATTAGATTTGCTTGATTTAGATCATGGCCTAAGGGAATATGAGGTATAAGTTG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E378638] SGN-U575183 Tomato 200607 Build 2 18 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T1854 [Download][View] Facility Assigned ID: TUS46A2.ab1
Submitter: Koni Sequencing Facility: Giov. Lab
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.952 Expected Error Rate: 0.0083 Quality Trim Threshold: 12.5