EST details — SGN-E378729
| Search information |
| Request: 378729 | Match: SGN-E378729 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C184064 | Clone name: TUS-43-M22 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C184064 is on microarray TOM1 spot ID 1-1-3.1.18.6 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C3903 [cLEC-22-M19] | Trace: SGN-T28179 | EST: SGN-E204015 | Direction: 5' | Facility: TIGR |
| Sequence |
| Sequence Id: SGN-E378729 | Length: 250 bp (1027 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E378729 [] (trimmed)
ACTCAAAGAAATAGAAAAATACAATTTAATTGGAATTGGACCATTGATTCCTTCATCATTCTTGGGTGGAAAAGATTCATTGGAATCTTCATTTG
GTGGTGATCTTTTTCAAAGTCAAATGATGACTACATGGAATGGTTAAACACAAAGCCTAAATCATCAATTGTTTATATCTCATTTGGGAGTCTAT
TGAATTTATCAAGAAACCAAAGGGAGGAGATTGCAAAAGGGTTGATAGAGATCCAAAGGC
GTGGTGATCTTTTTCAAAGTCAAATGATGACTACATGGAATGGTTAAACACAAAGCCTAAATCATCAATTGTTTATATCTCATTTGGGAGTCTAT
TGAATTTATCAAGAAACCAAAGGGAGGAGATTGCAAAAGGGTTGATAGAGATCCAAAGGC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E378729] | SGN-U578221 | Tomato 200607 | Build 2 | 135 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T1809 [Download][View] | Facility Assigned ID: TUS43M22.ab1 |
| Submitter: Koni | Sequencing Facility: Giov. Lab |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.884 | Expected Error Rate: 0.0022 | Quality Trim Threshold: 20.5 |
Working
