EST details — SGN-C37880
| Search information |
| Request: 37880 | Match: SGN-C37880 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C37880 | Clone name: cLEG-43-H16 |
| ||
| Library Name: cLEG | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: breaker fruit
Microarray: Alias clone SGN-C180706 is on microarray TOM1: SGN-S1-1-1.1.17.18
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C180706 [TUS-35-A24] | Trace: SGN-T1640 | EST: SGN-E378578 | Direction: 5' | Facility: Giov. Lab |
| Clone: SGN-C180706 [TUS-35-A24] | Trace: SGN-T193600 | EST: SGN-E392274 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E259269 | Length: 528 bp (935 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E259269 [] (trimmed)
CCACAGCAACCAACTGGTTCATTCCTTTTCTTGGGGCCAACTGGTGGGGGAAAGACTGAACTTGCTAAAGCTCTTGCTGAGCAGCTATTTGATGA
TGACAAATTGATGGTCAGAATTGACATGTCCGAATACATGGAACAACATTCTGTTGCCCGGTTGATTGGTGCTCCACCAGGTTATGTTGGACATG
AGGAAGGAGGGCAACTTACGGAAGCTGTAAGGAGGCGCCCTTACAGTGTTGTGCTATTTGACGAAGTGGAAAAAGCTCACCCTGCAGTGTTTAAT
GCCTTGCTTCAAGTGTTGGATGATGGAAGATTAACTGATGGTCAAGGTCGTACTGTTGATTTCACCAACACTGTGATCATTATGACCTCAAATTG
GGAGCAGAGTATCTCTTGTCAGGATTAAGTGGCAAGTGTACCATGGAGAAGGCCCGTGAAATGGTCATGCAGGAGGTGAGGAAGCAATTTAAGCC
CGAGTTACTCAACAGGCTCGATGAGATTGTGGTGTTCGATCCTTTATCACACG
TGACAAATTGATGGTCAGAATTGACATGTCCGAATACATGGAACAACATTCTGTTGCCCGGTTGATTGGTGCTCCACCAGGTTATGTTGGACATG
AGGAAGGAGGGCAACTTACGGAAGCTGTAAGGAGGCGCCCTTACAGTGTTGTGCTATTTGACGAAGTGGAAAAAGCTCACCCTGCAGTGTTTAAT
GCCTTGCTTCAAGTGTTGGATGATGGAAGATTAACTGATGGTCAAGGTCGTACTGTTGATTTCACCAACACTGTGATCATTATGACCTCAAATTG
GGAGCAGAGTATCTCTTGTCAGGATTAAGTGGCAAGTGTACCATGGAGAAGGCCCGTGAAATGGTCATGCAGGAGGTGAGGAAGCAATTTAAGCC
CGAGTTACTCAACAGGCTCGATGAGATTGTGGTGTTCGATCCTTTATCACACG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E259269] | SGN-U579266 | Tomato 200607 | Build 2 | 55 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T72631 [Download][View] | Facility Assigned ID: TBFGP44TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.981 | Expected Error Rate: 0.0076 | Quality Trim Threshold: 14.5 |
Working
