EST details — SGN-E379054
| Search information |
| Request: 379054 | Match: SGN-E379054 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C168577 | Clone name: TUS-3-H15 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C168577 [TUS-3-H15] | Trace: SGN-T395 | EST: SGN-E379360 | Direction: 5' | Facility: Avesthagen |
| Sequence |
| Sequence Id: SGN-E379054 | Length: 767 bp (783 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E379054 [] (trimmed)
CATTTTATTCTTAATCAATGTTTTCGCTAATTAAGGATAAGTCAGCAAAACGATCTGTCAATTAATTCACTAAATACTAAATTATCTACATTTTG
GACTACATATCTCCAAATCATTAAAAAAATACAACCTGATTAATAACGCTGATACCAGTTTTTTACTTGTAACGTACAAGCAAAAACTCTAACTA
AAGAAATTAAAATGAATCACAGTGTGTAATCTTTGTGATCACCAGGAGAGGTGGATGGGAAGCTACAAAGCACTGGAAATGGCTCAGTAACCTTC
ATATTCTGCCCAGATTTTTCGTCAATATGATGATTTCCGCTGCGTGAGCCAATGATAGATGTAAGAGCAACAGCCAATGCAGATTGAAACTTCGG
ATCTGATGTTATTGCTTTTGTTGCAGCTGCAATTGTGTCTTGTGGTAATAAAGTCTGTGTAGATGCCGCGCTTTTTATATTGTTTTGTAGATAAG
ACTGGGAATGGGTGTCTTGGTTATTTCTGTTACTCCAAGACATAGGAAGAAGATGATTAGATTCAAAGGAACTGAAATTGAGAATATTTGTGGAT
GAATTATTATTATTATTATTATTATATCGCGGGGGATAATTATTACTATTCGCGATTGTTCTATAATTTTGGCCAGGAAATGAGGAAGTGGACGA
GTTTGATGTTAAATCAAGAGTGATTGTAGGGTACTGAGAATGTGATGATGAAGAAATGGATGAATGTGGAAGGTTATAAAATGGGTTTGGTTTTG
AGTTATC
GACTACATATCTCCAAATCATTAAAAAAATACAACCTGATTAATAACGCTGATACCAGTTTTTTACTTGTAACGTACAAGCAAAAACTCTAACTA
AAGAAATTAAAATGAATCACAGTGTGTAATCTTTGTGATCACCAGGAGAGGTGGATGGGAAGCTACAAAGCACTGGAAATGGCTCAGTAACCTTC
ATATTCTGCCCAGATTTTTCGTCAATATGATGATTTCCGCTGCGTGAGCCAATGATAGATGTAAGAGCAACAGCCAATGCAGATTGAAACTTCGG
ATCTGATGTTATTGCTTTTGTTGCAGCTGCAATTGTGTCTTGTGGTAATAAAGTCTGTGTAGATGCCGCGCTTTTTATATTGTTTTGTAGATAAG
ACTGGGAATGGGTGTCTTGGTTATTTCTGTTACTCCAAGACATAGGAAGAAGATGATTAGATTCAAAGGAACTGAAATTGAGAATATTTGTGGAT
GAATTATTATTATTATTATTATTATATCGCGGGGGATAATTATTACTATTCGCGATTGTTCTATAATTTTGGCCAGGAAATGAGGAAGTGGACGA
GTTTGATGTTAAATCAAGAGTGATTGTAGGGTACTGAGAATGTGATGATGAAGAAATGGATGAATGTGGAAGGTTATAAAATGGGTTTGGTTTTG
AGTTATC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E379054] | SGN-U599787 | Tomato 200607 | Build 2 | 1 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T939 [Download][View] | Facility Assigned ID: 239_H03_TUS03H15.Td_030.ab1 |
| Submitter: Koni | Sequencing Facility: Avesthagen |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.956 | Expected Error Rate: 0.0040 | Quality Trim Threshold: 20.5 |
Working
