EST details — SGN-E379134
| Search information |
| Request: 379134 | Match: SGN-E379134 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C168396 | Clone name: TUS-3-A2 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C168396 [TUS-3-A2] | Trace: SGN-T244 | EST: SGN-E379183 | Direction: 5' | Facility: Avesthagen |
| Sequence |
| Sequence Id: SGN-E379134 | Length: 766 bp (776 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E379134 [] (trimmed)
AGATAAGAGATCCGTCTACCAAATATCTTATCCATGGTTTCACACGAAAAATTCAAAGGTTTTTCCAAAGAACTGAGATTTTGGTCACAGAAGGA
TCAAACTGTTTCTGAAGAACAGAGAAATACCCAAATGTAATAACAGAGGCGCACAACATTGAACAAATTCCGAGCACAGATACAGCTGTTATAAG
TCTCTCTACACAAAAAATACCGCGAAAAGAATATTACTTTTCAATTAGAGGATGGACCACTATCAACCATGTCTGTGTTTTCACTGCGCAAACTG
CTATCTCTTCTGTACATTGGTTTCGCACCCTGAAAAATTGTCCCCAGCTTTTTCATGGCCCTAGCACGTAGCCTGACAGTATCCTTAGGAACATT
GGGCTCTTTAAGGACCGCTTGGCAAACACGCGATAAAGTTAACTCAATATCCACGACGTTAATTTGCCAAAGTGATTTAATCATGATATCTTTCT
TCTCTTCCATTGTTTTGATTGCATCCTCTACTTTGTTCTCCTCGTGGTACTTCTTTTGCTCTTCTTGTATTTGAAGTAAAGAAACAGCCCCTGAA
GCCGCCATTGCTTGTGATTTTATTAGGTGTCCTTTGTCCCTTACCCATTCTGCCAAAAATGGCACCTTCATGAATCTTTTAGTTTTCCCAATTTC
TCTGGCTGCTTGCCTTGTGTAGATATAACCAATAGTATGCAGCATAGCCTCNACCAAAGCAGCTTGAGCAAGATGTTGCGCTTCTGATTGTGCCC
ATTGTA
TCAAACTGTTTCTGAAGAACAGAGAAATACCCAAATGTAATAACAGAGGCGCACAACATTGAACAAATTCCGAGCACAGATACAGCTGTTATAAG
TCTCTCTACACAAAAAATACCGCGAAAAGAATATTACTTTTCAATTAGAGGATGGACCACTATCAACCATGTCTGTGTTTTCACTGCGCAAACTG
CTATCTCTTCTGTACATTGGTTTCGCACCCTGAAAAATTGTCCCCAGCTTTTTCATGGCCCTAGCACGTAGCCTGACAGTATCCTTAGGAACATT
GGGCTCTTTAAGGACCGCTTGGCAAACACGCGATAAAGTTAACTCAATATCCACGACGTTAATTTGCCAAAGTGATTTAATCATGATATCTTTCT
TCTCTTCCATTGTTTTGATTGCATCCTCTACTTTGTTCTCCTCGTGGTACTTCTTTTGCTCTTCTTGTATTTGAAGTAAAGAAACAGCCCCTGAA
GCCGCCATTGCTTGTGATTTTATTAGGTGTCCTTTGTCCCTTACCCATTCTGCCAAAAATGGCACCTTCATGAATCTTTTAGTTTTCCCAATTTC
TCTGGCTGCTTGCCTTGTGTAGATATAACCAATAGTATGCAGCATAGCCTCNACCAAAGCAGCTTGAGCAAGATGTTGCGCTTCTGATTGTGCCC
ATTGTA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E379134] | SGN-U586144 | Tomato 200607 | Build 2 | 21 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T788 [Download][View] | Facility Assigned ID: 237_A02_TUS03A2.Td_007.ab1 |
| Submitter: Koni | Sequencing Facility: Avesthagen |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.975 | Expected Error Rate: 0.0056 | Quality Trim Threshold: 20.5 |
Working
