EST details — SGN-E390101

Search information 
Request: 390101Match: SGN-E390101
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C173887Clone name: TUS-17-E21
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C173887 is on microarray TOM1 spot ID 1-1-4.1.17.7 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C6324 [cLEC-35-B2] Trace: SGN-T30714 EST: SGN-E210366 Direction: 5' Facility: TIGR
Clone: SGN-C173887 [TUS-17-E21] Trace: SGN-T197464 EST: SGN-E396138 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E390101Length: 628 bp (850 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E390101 [] (trimmed) AACACTGAGATCTCTATTTAGCACAGAGCAGAAGCGCCATGGCTTCGTGCTGTTCATTGAGCTTCTCAACAGTCTCTTCAAAGCCTAACAAGCCT
TACTCATCACCAATTTCTTCTTCTCTTGAGCTCCCCTTTACTTCCCAGTTGCCATTTTCTAAAAAATATTCACTTTATTCCAATCATACCCTTCT
CCAAACTCAATGCCGGAAAACCCAATCACCGGATTGTCCCAGTTTCTTGGTTGTGGGATCTGCGAAAAAGCAAGAACCTTTGAGGGTAATGATAT
CGGGAGCTCCTGCTTCTGGTAAAGGAACGCAATGCGAGCTCATTACCAAGAAGTACGATTTGGTGCATATTGCTGCTGGAGATTTATTGAGGGCT
GAAATTGCTGCAGGCACTGAAAATGGGAGGAGAGCAAAGGAGTATATGGATAAAGGACAATTGGTACCAAACGAGATAGTTGTAACGATGGTCAA
AGAGCGGTTGATGTGTCCAGACTCTCAAGAAAAGGGTTGGCTTTTAGATGGATATCCTCGGAGCTTGTCTCAAGCAGTAGCTCTCAAAGAGTTCC
AGCCAAACCTTTTCATTCTTCTGGAAGTACCTGAAGAGATACTTGTTGAGAGAGTGGT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E390101] SGN-U581443 Tomato 200607 Build 2 61 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T191427 [Download][View] Facility Assigned ID: FA0AAD5AC11RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.973 Expected Error Rate: 0.0023 Quality Trim Threshold: 14.5