EST details — SGN-E390242

Search information 
Request: 390242Match: SGN-E390242
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C182651Clone name: TUS-40-C1
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C182651 is on microarray TOM1 spot ID 1-1-8.3.6.19 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C117415 [cTOA-8-C10] Trace: SGN-T124921 EST: SGN-E312732 Direction: 5' Facility: TIGR
Clone: SGN-C182651 [TUS-40-C1] Trace: SGN-T191791 EST: SGN-E390465 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E390242Length: 742 bp (869 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E390242 [] (trimmed) GGAAAGCCAGTTAAATATTCGTTAACTTGGATTTGAAGCTTGCTCTCCAATGGTGTCCTTGTACAACACTGGACTGGAATTGGCAAATCTACTGT
TAGGATCAGACCTATTGAATCAGTCATGGGAAGCAATTTCAAAGCTTCAAAAACAGAATCTCACTCTTTTGGAAGACCCATCACTTCCTTTCTCT
GTTAAAAACCAAATTTATGAAAGCCCATCAAAGGGTTCTATTATAGCTTTTGTATCTTCACCCAATTGTGCTGTTAATCATTTGAAAGAAGAGTT
CAGAGAGCTGATTTCTTCAGATCAAATCACGTCATTCGACTTTCTTCGCACCAGAAGTAATACTAGTTCCATCTCCATTCATAAAGCTGCTTTTG
CCCTTTTTGCTTCTCTTGAGAAGGAGCTCTCGCTTCTCAAACAACAGTTCACCAGCAGCCAACCTCTAATTGTAACTGGACATTCTCTGGGAGGA
TCAGTTGCATCTCTCTTCACCTTGTGGCTGCTTGAGAGCCTTCCCAGCTATGGTGTGCAGCATATCCTCTGCATTACTTTTGGGTCCCCACTTCT
TGGTAACAATGGCTTTCAAAAAGCCATGTCAGAGCATCCGATGTGGAGCTCTTGCTTCTTGCATGTGGTCTCAGATAAAGATCCAGTTCCAGGAT
TCCTGATCTCAGACCATAATGCCTCTGCTGCTACCTTGACTACTCCGACCTGGTACATGCCCATTTGTACCTATCTC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E390242] SGN-U567189 Tomato 200607 Build 2 11 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T191568 [Download][View] Facility Assigned ID: FA0AAD28AB01RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.963 Expected Error Rate: 0.0034 Quality Trim Threshold: 14.5