EST details — SGN-E390310

Search information 
Request: 390310Match: SGN-E390310
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C173873Clone name: TUS-17-E7
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C173873 is on microarray TOM1 spot ID 1-1-2.1.18.20 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C6294 [cLEC-35-A10] Trace: SGN-T30638 EST: SGN-E210290 Direction: 5' Facility: TIGR
Clone: SGN-C173873 [TUS-17-E7] Trace: SGN-T191422 EST: SGN-E390096 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E390310Length: 717 bp (898 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E390310 [] (trimmed) AACAAAATAAATAGTTACAAATTGAAGAAGTTATTTGGATGGGATAAATTCCATCAAGTTACAGAAAAAAGAAAAGACCAAACCAATTGGATACT
AAGATGTCTAGCTAGAGCTAAACAAAAGTTGACAAGAAACAAAACTTGATAGCTACACAGATTTTAACTTGCTGAAATAAAATAGATAATGCTTC
ACTGATTTACGGCGTTGAGCAGTCTTCAGATATCATAGCTAGGTCTCCTTACCGGCTAACAGAGGAGTGGAAGTTGCAGAGAAACCAACTCCATT
AGACTCGGGGGTGGAGCACTCAGGCGATTTCTTGCTGAGGCCATATGGTGCTAAGTTCATCACCCTTTCCTTGCGCTTCTCCAGAAAACGAGCCA
AAGATGCTTTCCTAGCTTGTGGAACCGCTGCTGTCATTATGGTAGTCGCCCCAACAGGTCCTAGTGATGTCACAATCTTTGAAGTGTCCAATTTG
ACATGGGGAGTCACTGAAATGTTTGCAGTTTTAGACATCTTCATGTCATCTTTGTTTCCAGAACTGCCATCAGATTGACCAATGGGATGGGAAGA
AACGGACATAGGGCTAGAAAGACCCGAGGCAGGCAGCATGTTTGGGGTTTGGTTCACACAAACACCATCTGCAGCAGCAGGTTTCGATGCAGATG
CCTGAAGTTGAAACCTTGGCTGCACCACATTAGGTGGAGCACAGCCATGTCC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E390310] SGN-U564449 Tomato 200607 Build 2 121 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T191636 [Download][View] Facility Assigned ID: FA0AAD5AC04FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.970 Expected Error Rate: 0.0026 Quality Trim Threshold: 14.5