EST details — SGN-E390332

Search information 
Request: 390332Match: SGN-E390332
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C174081Clone name: TUS-17-M23
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C174081 is on microarray TOM1 spot ID 1-1-2.1.17.9 [Order] [Tomato Microarray Database]
See unigene SGN-U577319 for alternative clones/ESTs which are mapped
Additional sequencing 
Clone: SGN-C6947 [cLEC-37-F20] Trace: SGN-T31267 EST: SGN-E208276 Direction: 5' Facility: TIGR
Clone: SGN-C174081 [TUS-17-M23] Trace: SGN-T197469 EST: SGN-E396143 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E390332Length: 628 bp (866 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E390332 [] (trimmed) CTATAAAACACAAGTTTATCAACTTGTAAAAAACAAATAATCCATATAAATTCAAATTAACATACATATAAATAGACGGAGAACAAGCACGATTT
GTTTTGCATTTAGTTGAAAATCACTTTTTGCTGCAATATCAGGAAAGCATTAATTACCAACAAATGGATAATCAAGAACAAACGCACTTTTATCC
AAGAATGCAGTCGGATGTAATAGTCTATATTGCCTGAATTCACCATTCAGTAAGTCTGAAAAGCTCGCCCACAGAATTTCCAAGGCAGTTCAAGT
GCAACTCAGCGCTAAATGTAATAAAGTACAGTCGATGTAAAAGTACCGAATAATCATGTATAATGTGACCAACTCGAGTACATCAGTGTCCAATA
TGTGAAACCAACCCAATCAAAGACTTTAAATCACATAGGAACAACACGGGCCTTGGACGGGCGAATATAAGCCATATGCCAATCACCACCCCCTG
AAAGTTTAGTGATGTCCTCTTCTCGCTGCGGGATTGGATTGTCATCATCGAATTGAACCCACTTTCCGTTCTCTTGCTTGACCCAGGCAACATAA
TGCCCTGAGTCGGCACTTCTTCTCTTGTGAGTCAGCACCGCCCCCAAATCATATATTC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E390332] SGN-U577319 Tomato 200607 Build 2 47 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T191658 [Download][View] Facility Assigned ID: FA0AAD5AG12FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.960 Expected Error Rate: 0.0051 Quality Trim Threshold: 14.5