EST details — SGN-E390351

Search information 
Request: 390351Match: SGN-E390351
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C173832Clone name: TUS-17-C14
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C173832 is on microarray TOM1 spot ID 1-1-3.3.17.2 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C5650 [cLEC-32-I8] Trace: SGN-T29975 EST: SGN-E207762 Direction: 5' Facility: TIGR
Clone: SGN-C173832 [TUS-17-C14] Trace: SGN-T191676 EST: SGN-E390350 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E390351Length: 709 bp (862 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E390351 [] (trimmed) AAGAGCCTTCAGACAAGATCAGGGGCACGAATTCAGCTGGTGCCACTTCCTTCTGATGGAAAAGAATCTAAAGAAAGAACAGTACGTGTGACTGG
TGATAAAAAGCAAATTGAGATGGCACGGGAGATGATCAAAGAAGTCATGAGTCAGCCTGTGAGGCCAGCAAGTCTCTCTTCTGGTTATGGTCAGC
AGCCATTTCGCCCACGTGGCGGAGGTGCCCCCCCTCAATGGGGACCCCGTGGTGGTCATCCTGGGCAGTTTCCAGGTTATGATTACCATCAAAGA
GGACAATACTCATCTCGAAGCCCACAATATCCACCTCCTGCCTATGGAAATTATCCTCCACAACAAGCACCAAGAGGCGGATTTGGTCCAGGTTG
GGAGCAAAGGCCTCAAGCCTCTATGCAGGGCCCTCCATCACAGGCAAACTACAACTATGGGCAGCAACATGGTCCAGATTATGGCCATTCATACC
CTCATCAGACACAGCATGGACAAGGCTATGGACATGGATACACTGATGTAAAATATGACCACCAGATGGCACCGCAAAATCAGTATGGAGGACAT
GGACCTTCTCAGCCAACATCTTACCCTCAAAGTGGTGCACATCCCAGCTATGGAACCCATGAGCAATACGGTAAACCTCCTTCCTATGGTATGCA
TCCACAGGCTTCGCAATCTTATAGCCATCCAAGGGCTAATCAAC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E390351] SGN-U569992 Tomato 200607 Build 2 47 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T191677 [Download][View] Facility Assigned ID: FA0AAD5BB07RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.980 Expected Error Rate: 0.0033 Quality Trim Threshold: 14.5