EST details — SGN-E390391

Search information 
Request: 390391Match: SGN-E390391
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C183249Clone name: TUS-41-K23
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C183249 is on microarray TOM1 spot ID 1-1-2.3.3.14 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C79857 [cLET-10-G15] Trace: SGN-T104954 EST: SGN-E290785 Direction: 5' Facility: TIGR
Clone: SGN-C183249 [TUS-41-K23] Trace: SGN-T197478 EST: SGN-E396152 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E390391Length: 729 bp (850 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E390391 [] (trimmed) GCTTCTTTTGCAATAGTATGAGACCTGTCCATCTAAGCAAAACTTACACTAACTTGAATTTCTTTTGATCACTAGAGTAAATTGAATTCTACAGT
GTAGATTTTTAGACAAAGTAATTGGAAGGGCAATTCTACTGTGAGTAGATTGCAGTAATCTCCCAATAAATATGAACTTATATCACAACCTTCAA
AAATATTTGATCGACACTCAACATAATGTGCTCGGCAATAGTAAAAGAATCTCCTTTGCATGAAATTCAGGGTAGCTACGAGTTTCCGAATGATA
CATTCAGTCATTACGCCTCCGCTTCCGAAAATGCCTGAGGATAAAACTGTCAGCATAGAGTGGATAGTTTTTTCTAATTAACCCCTTTATGCATT
TCCAGTATGAAAAGTCCACTGTTTCACCATCCTTGCGGACAATAAATAAACATCTTGAGTTTTCAAAATCTGGATGGTACCCTACAGTAATGTAA
TCAACTCCAGGGCCAATCTTCTTGTCGCATTCCGGGTGATATGGGAGCAATCTTTGTAGAATTGTTCTCTGATGATCAGGACTTAACCTATCGCC
AATTGCATATTTTCCAGAATGAAGAATCATTCTAACAAAACCAACAAGCGGCACAGTATCCTCTAAAATCTGGTCCTCCCAATCAACCCAACCCT
CTCCATCTCCGCTCTTCTTCCCTACTTCATCATCCGATTCCTCCTTCACCACTCCTCACTTTCT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E390391] SGN-U570991 Tomato 200607 Build 2 24 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T191717 [Download][View] Facility Assigned ID: FA0AAD29AF12FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.964 Expected Error Rate: 0.0019 Quality Trim Threshold: 14.5