EST details — SGN-E390464

Search information 
Request: 390464Match: SGN-E390464
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C182625Clone name: TUS-40-A23
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C182625 is on microarray TOM1 spot ID 1-1-2.1.5.6 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C117427 [cTOA-8-C5] Trace: SGN-T124880 EST: SGN-E312691 Direction: 5' Facility: TIGR
Clone: SGN-C182625 [TUS-40-A23] Trace: SGN-T191567 EST: SGN-E390241 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E390464Length: 713 bp (845 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E390464 [] (trimmed) CCGAGTAAATTTATTATTTAAAGAATTAGGATAAATAATAAAACATGGATGCACACCGTAACAATGACTCTAGCCATACAATACAATTAAATTTA
AACAACAACTAAAATAAACATTGCATTTAAATCAACAATACGATACAACAATTTCAATACAAAAAGGGGAAAACAGCTTTTCTATTCTTAGGATA
ATCTTCTCCAAATTTCTGCAGGTACCATTTATGATTCGAAACAGCTCGAGGAACCAAATTAGCACAGGTGTAGACAAAAAATGCAAGCCCGGCCC
AAGACCAGGTCATCAAAGCCCAGCCCAACCATTCCATTATCTCTCCCAAATAATTTGGGCTGCTCACATAATCAAAAAGCCCACCTCTCGGTATC
TTGTATCCACCTCCTTGACTCTTCAGGCCCAACAAAACCCCATCGGCCCAAATATTCAACAACATACCCGACCCGAATATAACCAGCCCAATACC
AAACCTAACCCAAAACCAGTCGTCTTCTTGGTAGTTAGCATAATGAGAAACCCATCTGCTCTGTATGTAAGCATTCAGTAAATTGAAAATAAAAG
CTGTAACTGCAATATTCAGCGGGAAATTGTTCTTTGTGTTTCTGCTACGGAGGCGAAGAGGGTAAATGATTGTTCGATTTGTGTAGTGAAAGAGG
TAAAGGTGAAATTAGGAGAAAAGCTAATGGATTTGTGTAATTTTTCCC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E390464] SGN-U575501 Tomato 200607 Build 2 11 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T191790 [Download][View] Facility Assigned ID: FA0AAD28AA12FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.953 Expected Error Rate: 0.0024 Quality Trim Threshold: 14.5