EST details — SGN-E390468

Search information 
Request: 390468Match: SGN-E390468
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C182673Clone name: TUS-40-C23
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C182673 is on microarray TOM1 spot ID 1-1-2.3.5.6 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C111634 [cTOA-11-K2] Trace: SGN-T125317 EST: SGN-E312162 Direction: 5' Facility: TIGR
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E390468Length: 279 bp (839 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E390468 [] (trimmed) TGTGATAGTTGGACTGCCATTGAATTGAAGCATTTTTTCTTTTGACAATAAGTGTTGAGACATAAGAGAATTTGTCGCCATTTCTATCACGCCCC
TCTACAATCCTTCTTATGCTAGTATTTATATATTTTTGATTTCATCTGGAATTGAAACAGGTGTGATACCAAACATACCTGTACTTGAAATATGT
GTGCCATGTTTGAGATTACCATCCATCTTGAACCCGCCGAGAGTATCCTTGAGCATCACATGATTTACTAGTGATACTCGTTTCAATGG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E390468] SGN-U580370 Tomato 200607 Build 2 46 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T191794 [Download][View] Facility Assigned ID: FA0AAD28AB12RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.947 Expected Error Rate: 0.0260 Quality Trim Threshold: 12.5