EST details — SGN-E390563

Search information 
Request: 390563Match: SGN-E390563
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C184305Clone name: TUS-44-G23
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C184305 is on microarray TOM1 spot ID 1-1-2.3.16.10 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C15044 [cLED-10-D22] Trace: SGN-T51200 EST: SGN-E231349 Direction: 5' Facility: TIGR
Clone: SGN-C184305 [TUS-44-G23] Trace: SGN-T192123 EST: SGN-E390797 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E390563Length: 607 bp (840 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E390563 [] (trimmed) TTGATTACATTCAAATACATGGATATGGTAATTGGAGGACTCTTCCAAAGAGTGCTGGGCTTCAGAGATGTGGAAAAAGTTGTAGGCTTCGTTGG
ACTAATTATCTAAGGCCAGATATTAAAAGAGGAAGATTTTCATTTGAAAAAGAGGAGACTATCATTCAACTCCACAGTATTTTAGGCAACAAGTG
GTCTGCTATTGCTGCACGTTTACCTGGTAGAACTGATAATGAAATCAAGAACTATTGGAATACGCATATCAGGAAAAGGCTTTTGAGAATGGGGA
TTGATCCAGTGACAGCACATGTCCACGTCTTGATCTTCTTGATCTTTCTTCCATTTTAAAGCATTCAATTTACAATAATTCATCTCATCATCAAA
TGAACCTTTCAAGATTGTTAGGCCATGTGCAACCTTTGGTTAATCCTGAACTCTTGAGATTAGCTACTTCTCTTATATCATCCCAACGCCAAAAC
ACAAACAACTTTTTAATCCCAAATAATCTTCAAGAAAATCAAATAATTTGCCAAAACCAATTGCCACAAATGGTCCAAAATAACCAAATTTCAGA
TTTTTCAACTATAAGTACCACCCCATGTGTTCCATTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E390563] SGN-U574375 Tomato 200607 Build 2 4 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T191889 [Download][View] Facility Assigned ID: FA0AAD32AD12RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.956 Expected Error Rate: 0.0115 Quality Trim Threshold: 14.5