EST details — SGN-E390622

Search information 
Request: 390622Match: SGN-E390622
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C185448Clone name: TUS-47-G14
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C185448 is on microarray TOM1 spot ID 1-1-3.3.9.3 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C78051 [cLES-4-C7] Trace: SGN-T97835 EST: SGN-E282094 Direction: 5' Facility: TIGR
Clone: SGN-C185448 [TUS-47-G14] Trace: SGN-T192186 EST: SGN-E390860 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E390622Length: 373 bp (861 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E390622 [] (trimmed) GGTTGACGTGTTGTTGCTCGGTGGAGGAATGATCTTTACTTTCTACAAGGCCCAAGGTTATGCTGTTGGATCATCACTAGTGGAGGAGGACAAAC
TTGACTTGGCAACATCTCTCATGGAGAAGGCAAAGACAAAAGGGGTATCTCTATTGCTTCCCACGGATGTAGTGATTGCGGACAAGTTTGCTGCT
GATGCGAACAGCAAGATTGTTCCGGCCTCTGAAATTCCTGATGGCTGGATGGGATTAGATATTGGGCCTGATGCCATCAAGTCCTTTGGCAGTGC
CTTGGATACCACCAAGACTATCATTTGGAATGGACCGATGGGTGTGTTTGAATTTGACAAGTTTGCTGCTGGAACGGACGCTATTGCA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E390622] SGN-U578082 Tomato 200607 Build 2 159 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T191948 [Download][View] Facility Assigned ID: FA0AAD35BD07RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.975 Expected Error Rate: 0.0029 Quality Trim Threshold: 14.5