EST details — SGN-E390625
| Search information |
| Request: 390625 | Match: SGN-E390625 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C185490 | Clone name: TUS-47-I8 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C185490 is on microarray TOM1 spot ID 1-1-1.1.10.21 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C79094 [cLES-7-M16] | Trace: SGN-T98904 | EST: SGN-E288148 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C185490 [TUS-47-I8] | Trace: SGN-T192191 | EST: SGN-E390865 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E390625 | Length: 545 bp (882 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E390625 [] (trimmed)
CTCCAGTGCAGCCTCCCTCTCTCCTTCTTCTAGGAGGCAGCAGCGCCGCTACTCTTTCTCCTCCACGACGAGCTCCGGCGAAATGTGTCCGACGC
CGTCCTCTTTCTCCTCTCTCGCCTGACCCTTTCCCTTTACCCTCGCTCTTCCACCTTCTCCTCTCTCCTCTCTTCTCCAGGCCAGGTGAGGAGAA
TAACAGAATCTCCAACGACAGTAAGCAACAGTAATTGGAGAGAACTAGCGAGGCGGTGCAGCCAGCAGCTCCGGCGATGCAGTGAAACCAGGCTA
GACTCACCGGCCAGGATCTTGATTTTAGAGTTCAAGGTTTTAAAGAATCCTTTTTTTAGAGGCGAAATCAGAATTTTCAAGAAGAGGGTTCAAAC
TCGATAAAGGGGGTTTAACATCTACTATATATACATAAAAAATTATTTTAACCATGTATAAGTAATATAATTTTTCGCCGAAGGGGATTCGAATG
AACCCTCTTGGTTCAAGGTGGCTCCTCCCCTGGTCGCTTTGGAGAAGATGTCGATGGATTTTAGTTTCTT
CGTCCTCTTTCTCCTCTCTCGCCTGACCCTTTCCCTTTACCCTCGCTCTTCCACCTTCTCCTCTCTCCTCTCTTCTCCAGGCCAGGTGAGGAGAA
TAACAGAATCTCCAACGACAGTAAGCAACAGTAATTGGAGAGAACTAGCGAGGCGGTGCAGCCAGCAGCTCCGGCGATGCAGTGAAACCAGGCTA
GACTCACCGGCCAGGATCTTGATTTTAGAGTTCAAGGTTTTAAAGAATCCTTTTTTTAGAGGCGAAATCAGAATTTTCAAGAAGAGGGTTCAAAC
TCGATAAAGGGGGTTTAACATCTACTATATATACATAAAAAATTATTTTAACCATGTATAAGTAATATAATTTTTCGCCGAAGGGGATTCGAATG
AACCCTCTTGGTTCAAGGTGGCTCCTCCCCTGGTCGCTTTGGAGAAGATGTCGATGGATTTTAGTTTCTT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E390625] | SGN-U575448 | Tomato 200607 | Build 2 | 17 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T191951 [Download][View] | Facility Assigned ID: FA0AAD35BE04RM1 |
| Submitter: Koni | Sequencing Facility: INRA |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.971 | Expected Error Rate: 0.0004 | Quality Trim Threshold: 14.5 |
Working
