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EST details — SGN-E390785

Search information 
Request: 390785Match: SGN-E390785
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C184239Clone name: TUS-44-E5
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C184239 is on microarray TOM1 spot ID 1-1-4.1.16.2 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C24321 [cLED-7-N20] Trace: SGN-T50453 EST: SGN-E231944 Direction: 5' Facility: TIGR
Clone: SGN-C184239 [TUS-44-E5] Trace: SGN-T191876 EST: SGN-E390550 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E390785Length: 465 bp (889 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E390785 [] (trimmed) CAAGACGGCAAAATGGTCATATTATTAGCACCGATGACTCTGAAATCTCATGTTCAACTTTAACAGAAAAACCAAAAAACAATCTGTAGTCTTGC
CATTGCCATTGCCATATGGCATAACAGAATCTTTAGCCAAACTATATACTTGAAGAATTGCTTTAAAAATGAAATCTTCTCTTCGATAGGGAACG
CTAGAATCCCCATACTGGCCTTCTCTGGCACAATCAAGGTTAGTCGGGCCAGTGGATTAGAAACATCGGAGTTTCCTACGAACAATGCAGAAACA
GCCTTGTATAACTTGATCTTCGGGTATCATTCCTCCTCCTTTGTTTGTGTCAATGACTTCCAACATTTTCACTACCTCATCCATTTCAGGTCGTT
TGTCTGGATTTGCGTCCCAGCATTTCTTCATGATATTTGATACAGAGCTTGGACAACATTTCGGGAGGGGGGGGCGCAAATTCTG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E390785] SGN-U575749 Tomato 200607 Build 2 2 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T192111 [Download][View] Facility Assigned ID: FA0AAD32AC03FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.965 Expected Error Rate: 0.0043 Quality Trim Threshold: 14.5