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EST details — SGN-E390792

Search information 
Request: 390792Match: SGN-E390792
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C184287Clone name: TUS-44-G5
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C184287 is on microarray TOM1 spot ID 1-1-4.3.16.2 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C24550 [cLED-8-M11] Trace: SGN-T50663 EST: SGN-E232730 Direction: 5' Facility: TIGR
Clone: SGN-C184287 [TUS-44-G5] Trace: SGN-T191882 EST: SGN-E390556 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E390792Length: 573 bp (893 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E390792 [] (trimmed) AAATCAAATTATAAAAATATTTATTTGAGCAAATCCAACACTTGAATTTCAAGGGCCACCAAAAGTCTCAATCTTGTGAGACTGAAAAGGAGCAA
ACTGAGACCTAACTAATATAGGCTGCTATAGAAAATTAGCCCATCCCATTTTCACGTGCACTTACTAGTCCTACCTACTGGCTACTGTTCTCCCA
AAAAAAAAGAAGACAAATATAGTAAACAATATATACAATTTATAACGACATGTCCTAGTGGCTGCCTGTCTTTCTCTGGAACATTTCAATGTGTC
AACATAATTTTCGTTTTAATTATTTATCCTTAGTGTTACTATTATTTTGCAAGAATTTTCCTGATATGGCGGCTGCTAAGGCTGCTTGAAAACTT
GGATCTTTAGTCAATGATGAAGCCATTTGTTCTATCAAGAAATGTTGAAACTCTGGTCTATTTTGCTGTTGTTGATCAGTTCCTGGTGATTTACG
CTTCTGACCACTTGCACTACTTGTACTTGTAATGCTATGAACTTTTTTGATATCATTTTGTAATGTTTTTGGTTCTGCCAAATCAAGAGTTAAGG
TTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E390792] SGN-U566776 Tomato 200607 Build 2 101 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T192118 [Download][View] Facility Assigned ID: FA0AAD32AD03FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.936 Expected Error Rate: 0.0026 Quality Trim Threshold: 14.5