EST details — SGN-E390796

Search information 
Request: 390796Match: SGN-E390796
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C184297Clone name: TUS-44-G15
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C184297 is on microarray TOM1 spot ID 1-1-2.3.16.6 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C24732 [cLED-9-G21] Trace: SGN-T50888 EST: SGN-E233327 Direction: 5' Facility: TIGR
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Sequence 
Sequence Id: SGN-E390796Length: 740 bp (871 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E390796 [] (trimmed) TACCGGGCCCCCCCTCTCAAATAATATATTATTCATTGATTTTATCATAACATCTCAAAACATTAAAATCAGACGAGTAAAGTCTAAAGGTGGAC
GGAGGTAGTATAGTTGGAGAGACAACCAAAAAAACAAAGTTAGGTTTGGACTTTTGATATACAAACTTGAGGATTACATTAGGAATAATAATCAT
CAATTGAAAACATGGTCAGTCGTCTTATTACTTAATTTTCATGTGTTAAATATCATTAATACTGCATCATACCTCTCTATGACTTTACTCCTAAT
AACAATTGTATGTATCTGCAATGAAGAATTTCAGAATGAATATCCTGGAAACTACCCTATATCCTTCTCTCAAGTTTCTTTGCTCCTTTTTTCTG
TTAATAGAACAAAGGACTCGTACCGTCTTTTTGTCAGACCTCCAGCAAATCGAGTTTATCCGTGGTTGGATGGATAGCAACATATGTCAGCGTAA
ATTTTATCCAGCAGAGGTTCACTTAGTCTCATAAGATAGCCTCTGGAAGTCCCAATTTGCTGTTACTAAGGAAGAGTTGTCGCGGAATATCACAT
TTGTGGAGACTTGATACAGTCTCAGCTTGTGTCAGTGTCAAAGAGCCTGTTAATGCTAGCAATGGTTCTAACAAAAACGCTTGACTCTCATTCTT
CCTTCCATCATCCCTTCGCATTTTCTCAAGTAAAGCGTTGCTAGTGTCTATACCTGAAAGGAAACCTTCCATGGA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E390796] SGN-U565691 Tomato 200607 Build 2 10 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T192122 [Download][View] Facility Assigned ID: FA0AAD32AD08FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: No vector sequence detected
Passed all screens and filters
Sequence Entropy: 0.963 Expected Error Rate: 0.0011 Quality Trim Threshold: 20.5