EST details — SGN-E390809

Search information 
Request: 390809Match: SGN-E390809
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C184393Clone name: TUS-44-K15
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C184393 is on microarray TOM1 spot ID 1-1-2.3.16.7 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C15757 [cLED-13-N23] Trace: SGN-T51738 EST: SGN-E236460 Direction: 5' Facility: TIGR
Clone: SGN-C184393 [TUS-44-K15] Trace: SGN-T191903 EST: SGN-E390577 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E390809Length: 483 bp (884 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E390809 [] (trimmed) ACGCTTAACAGATAATAAGTATCATAAACTTGAATAATAATAAGAAAATTCACGATTCTATTACAACTTAACTACATAAAAATTTCACCAAACAA
AAATTTTGAAAAAGTAAAAACAGACAAAAATACTCAAAACAAATAAAAATAATTATCCAAAATTGTTGATTTATTTTTTCAAGCAGAAAATAAAC
CATTAATTGCTGCTAGACCAATTTCAGTTTGAGGTACAAAAACATTTTTTTCATTTTCTCCAAATCTCATTTTAATATTTGATGAAGACCCCTTA
ATCTCTTGAACCAAAATAGAAAAAGATGAAAATAATTCAATTTTTTCTTCATTCCCAAATTTTCTTGAATTCTTGATCCTCCTTTCATATTCTTC
AGCAACCAACATAGCAATATCAGCCATAATAAAAATAATAATTAAAATATAAAATTTGAGTAGTAATTAATTGGAGGGGGGGGGGGGTTTTTTTT
GTTTTTTA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E390809] SGN-U579574 Tomato 200607 Build 2 25 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T192135 [Download][View] Facility Assigned ID: FA0AAD32AF08FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.868 Expected Error Rate: 0.0031 Quality Trim Threshold: 14.5