EST details — SGN-E390865

Search information 
Request: 390865Match: SGN-E390865
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C185490Clone name: TUS-47-I8
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C185490 is on microarray TOM1 spot ID 1-1-1.1.10.21 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C79094 [cLES-7-M16] Trace: SGN-T98904 EST: SGN-E288148 Direction: 5' Facility: TIGR
Clone: SGN-C185490 [TUS-47-I8] Trace: SGN-T191951 EST: SGN-E390625 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E390865Length: 602 bp (869 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E390865 [] (trimmed) AGATGATCACTCAAATTTATTTGCACATATATACTAGAGTTACAGTTTTATACAAATTATTGCAAAACCAAAATAAAACCGAAAGAGATACACAA
AGAAACTAAAATCCATCGACATCTTCTCCAAAGCGACCAGGGGAGGAGCCACCTTGAACCAAGAGGGTTCATTCGAATCCCCTTCGGCGAAAAAT
TATATTACTTATACATGGTTAAAATAATTTTTTATGTATATATAGTAGATGTTAAACCCCCTTTATCGAGTTTGAACCCTCTTCTTGAAAATTCT
GATTTCGCCTCTAAAAAAAGGATTCTTTAAAACCTTGAACTCTAAAATCAAGATCCTGGCCGGTGAGTCTAGCCTGGTTTCACTGCATCGCCGGA
GCTGCTGGCTGCACCGCCTCGCTAGTTCTCTCCAATTACTGTTGCTTACTGTCGTTGGAGATTCTGTTATTCTCCTCACCTGGCCTGGAGAAGAG
AGGAGAGAGGAGAAGGTGGAAGAGCGAGGGTAAAGGGAAAGGGTCAGGCGAGAGAGGAGAAAGAGGACGGCGTCGGACACATTTCGCCGGAGCTC
GTCGTGGAGAAAAAAGATAACGGCGCTGCTGC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E390865] SGN-U575448 Tomato 200607 Build 2 17 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T192191 [Download][View] Facility Assigned ID: FA0AAD35BE04FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read -- flanking 5' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.975 Expected Error Rate: 0.0072 Quality Trim Threshold: 12.5