EST details — SGN-E390990

Search information 
Request: 390990Match: SGN-E390990
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C185385Clone name: TUS-47-D23
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C185385 is on microarray TOM1 spot ID 1-1-2.4.9.6 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C70954 [cLER-16-G9] Trace: SGN-T95628 EST: SGN-E284355 Direction: 5' Facility: TIGR
Clone: SGN-C185385 [TUS-47-D23] Trace: SGN-T192317 EST: SGN-E390991 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E390990Length: 744 bp (818 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E390990 [] (trimmed) AACCACAAAAACAAAATACTAGAAATTTATTAATAAGCTGGAAGAGTGTCACAATATCATCGTCTAACGTAGCTGCCAAATTTAAATCATGATAT
ATAAAGAGCAGCAAAAACAACAGCTCCAGCAATCTTTTCAGAAATGAACCATTAACAAAAATATGTCACCACTCCCAGCTCTTCCAATCAGCATC
TTAAGCTTCAGCAAATCCCAATTCAGAAAGCTTCAAGTGAGCCTCAGCATAGTCAGCAAAGAAGGCATCTTCATCCGCAGCATATTTCTCAACAA
GGGGACGGAAAGCAGGATCACAAAGGAGAGCCTTGTCTGACTTTTTTTTGAAATGCGAACAATCATTTGATGATCATCCCAAAATTTTGAACAAA
TAATTCTTACCAAGACAAAACCGTTCCTCAGATATCCGAAAACTTAATGACAACCCAAAAAAAACAAGAATCATAAACTACTTAGGGGAGCTCCT
ACTTCTTCTACACAATAGCATTGGCAGCAGATGCAATCCTAGGCCATAGATCAGCACATTCTTTACCAATTGGGCCAGTGATGGCAGACCCTTTC
ATTTCTCCCTTGGGGTTCACAATCACACCAGCATTATCTTCAAAGTACATGAAAACACCGTCCTTTCGGCGCCATGGCTTGCGTTGACGAACAAT
GACAGCAGGCATAACCTTCTTCCTGAGATCTGGCTTACCCTTCTTCACAGTAGCCATCACCATATCNTCAACACAAGCT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E390990] SGN-U580698 Tomato 200607 Build 2 51 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T192316 [Download][View] Facility Assigned ID: FA0AAD35CB12FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.960 Expected Error Rate: 0.0016 Quality Trim Threshold: 14.5