EST details — SGN-E391005

Search information 
Request: 391005Match: SGN-E391005
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C185425Clone name: TUS-47-F15
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C185425 is on microarray TOM1 spot ID 1-1-2.2.9.3 [Order] [Tomato Microarray Database]
See unigene SGN-U579745 for alternative clones/ESTs which are mapped
Additional sequencing 
Clone: SGN-C185425 [TUS-47-F15] Trace: SGN-T192330 EST: SGN-E391004 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E391005Length: 670 bp (900 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E391005 [] (trimmed) AAAGGTCCTGAGGAATGGCTCATGCTATGGCTTCTATGGGTGGCCTAATTGGTTCTTCACAAACTGTCTTGGATGGTAGCCTCCAGCTTAGTGGC
TCAGCCCGCTTGAGTACTGTTAGCACCAACAGAATTGCCTTGTCTAGACCAGGACTCACTGTCAGAGCCCAACAGGGGTCTGTTGACATCGAAAC
TAGCCGTAGAGCCATGATTGGTCTTGTTGCTGCTGGCCTAGCTGGTTCCGTTGCTAAAGCAGCTTTTGCTGAAGCCAGGTCAATTAAGGTTGGCC
CCCCACCTCCTCCCTCGGGTGGATTGCCTGGAACTTTGAACTCAGATGAGGCAAGGGACTTCAGTTTGCCATTGAAGAATAGGTTTTACCTTCAA
CCGTTGACTCCAGCTGAGGCAGCCCAGAGAGTTAAGGATTCAGCCAAGGAGATTGTTAGTGTCAAGGATTTCATCGACAAGAAGGCCTGGCCTTA
CGTCCAGAATGACCTTCGTCTCAGAGCAGAATACCTTCGCTATGACCTTAAGACTGTTATCTCTGCTATGCCAAAAGAACAGAAGGGAAAACTCC
AGGATCTGTCTGGAAAGCTCTTTAAAACCATTATTGATCTGGACCATGCAGCAAAGACCAAGAACAGTGCTGAAGCACAAAAATACTATGCTGAA
ACTGT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E391005] SGN-U579745 Tomato 200607 Build 2 181 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T192331 [Download][View] Facility Assigned ID: FA0AAD35CC08RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.984 Expected Error Rate: 0.0060 Quality Trim Threshold: 14.5