EST details — SGN-E391223

Search information 
Request: 391223Match: SGN-E391223
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C185897Clone name: TUS-48-J7
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C185897 is on microarray TOM1 spot ID 1-1-2.2.7.6 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C17129 [cLED-18-L3] Trace: SGN-T53294 EST: SGN-E237991 Direction: 5' Facility: TIGR
Clone: SGN-C185897 [TUS-48-J7] Trace: SGN-T1912 EST: SGN-E378819 Direction: 5' Facility: Giov. Lab
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Sequence 
Sequence Id: SGN-E391223Length: 245 bp (971 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E391223 [] (trimmed) TGTAACTGCTTGTGAACTTTATTGAAATTCGAATTAATCATACACGGAATAAAAAGATGGAAAACAAGGGAAAATGAATACAATTTCTCAAGGGA
AAACCCAAAGGAGAATTCAAACAAACTGTCCCTATAAACATAGGGCAATTAGTTTTTCTAGAACTTATGATCCTTCGGGCTTGTAAACGATGAAA
CTGATGCTGTGCACTTGACAAAGATTTGTCGAACCAGATTATACTGACCCATGCC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E391223] SGN-U590550 Tomato 200607 Build 2 1 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T192549 [Download][View] Facility Assigned ID: FA0AAD36CE04RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.911 Expected Error Rate: 0.0195 Quality Trim Threshold: 14.5