EST details — SGN-E391250
| Search information |
| Request: 391250 | Match: SGN-E391250 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C186041 | Clone name: TUS-48-P7 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C186041 is on microarray TOM1 spot ID 1-1-2.4.7.7 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C75451 [cLES-14-C11] | Trace: SGN-T100488 | EST: SGN-E286667 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C186041 [TUS-48-P7] | Trace: SGN-T192817 | EST: SGN-E391491 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E391250 | Length: 238 bp (926 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E391250 [] (trimmed)
CCGGGCAGGTGCCTGATGCATTGCCCTCTTCTGTCTGGCTACACCATCCCTTGGTCGAAGCGTCTCTTTTTTAGGTTGTTTGTAGTTGAAGGAGA
GTGATTGTGATGTTTTCTCCTCGTCTTTTCTCTCATTTTCTCCTTTTATCTGATTTTGCACTTTTGTGGTTCTTTTTTTTCTTGGACCCAATAAT
GTCAATATTTATTGAATGAGAAAATTCCTATATCATATCAGTTTGAGG
GTGATTGTGATGTTTTCTCCTCGTCTTTTCTCTCATTTTCTCCTTTTATCTGATTTTGCACTTTTGTGGTTCTTTTTTTTCTTGGACCCAATAAT
GTCAATATTTATTGAATGAGAAAATTCCTATATCATATCAGTTTGAGG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E391250] | SGN-U579208 | Tomato 200607 | Build 2 | 88 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T192576 [Download][View] | Facility Assigned ID: FA0AAD36CH04RM1 |
| Submitter: Koni | Sequencing Facility: INRA |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.904 | Expected Error Rate: 0.0084 | Quality Trim Threshold: 12.5 |
Working
