EST details — SGN-E391390

Search information 
Request: 391390Match: SGN-E391390
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C185815Clone name: TUS-48-F21
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C185815 is on microarray TOM1 spot ID 1-1-4.2.7.13 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C185815 [TUS-48-F21] Trace: SGN-T192538 EST: SGN-E391212 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E391390Length: 770 bp (878 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E391390 [] (trimmed) AGATCATGCTGTTTGGCGTGAGGGTGAAGGTAGACCCTATGAGGAAAAGCGTGAGTTTGAACAATCTGTCTCAGTATGAGCAGCCTAATTCTAAT
GATAATAATAATAATAATAGCAACAGCGGAAATAACAATGACGCTTCTAAAGTTGCCGCCGACGAGGGTTATGCCTCTGCCGACGACGCTGTTCC
TCACCACTCCGGTAGTGGCCGTGAGCGTAAGCGAGGAGTTCCATGGACGGAGGAAGAGCACAAGCTATTCCTTTTGGGATTGCAGAAAGTGGGAA
AAGGAGACTGGAGAGGAATCTCTAGAAACTTCGTAAAAACTCGCACACCGACACAGGTTGCAAGTCATGCTCAGAAATATTTCCTCCGGCGAACT
AACCTCAATCGCCGGCGCCGCCGTTCTAGCCTCTTCGATATCACCACTGACTCGGTATCTGTACTAGCAACAGAAGAAACGAAAAATCTGCAACG
ACACTCCATTCCATCATTGCCTTGTATAGAAACATCAAAAATGAATGCATTTCAGGTGACATCTGTGCCAGTAAATTTTGGGCCTGTTATGTTGC
CAGAGAACCCAATAGAAAGTCCAATCCTTAGACAAGGAAATCAAAGTTATTATAATGGATCATCATCAATATTCCTCCGGCCGGCTCCTGTTGTT
GTTTCGTTGCCTAATTCATCAAAAACAGCTGACTTTAACTTGAATCAAAGCTCAGCAATGGAGACATCTTCGTTATCGTTGACTTTGTCGTTATC
ACCATCATCA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E391390] SGN-U581047 Tomato 200607 Build 2 16 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T192716 [Download][View] Facility Assigned ID: FA0AAD36CC11FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: No vector sequence detected
Passed all screens and filters
Sequence Entropy: 0.989 Expected Error Rate: 0.0007 Quality Trim Threshold: 20.5