EST details — SGN-E391551

Search information 
Request: 391551Match: SGN-E391551
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C173599Clone name: TUS-16-I21
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C173599 is on microarray TOM1 spot ID 1-1-4.1.18.17 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C3551 [cLEC-20-P16] Trace: SGN-T27861 EST: SGN-E206079 Direction: 5' Facility: TIGR
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Sequence 
Sequence Id: SGN-E391551Length: 589 bp (860 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E391551 [] (trimmed) GAACTTTTAATTGTACTTTAATAACTTGGAATTAAATGACAAATATTTTTATAAAAATGTTCTATGATTTCTTACAATTGTTGATTATACTCTAA
AAAAAAAAAAAAGAAATACAAAAACTCCAACATATTTGTTGATTTAATTTAATTACTACTTTCTAATTAGGACCAAATGTCTTCAATGTTGCACA
AATTGTTAAAAACATCTTCATTATCCATCCATAATTCTATATTATTTTGTTGATCCATTGCTTGATAATCTTCATACCATAATTGATCCCTTTGA
TTAACTTGATTATAATCTTGATTAGAGTTTTCTGATGAAGTTGCCACGCTGGAATTTTCTAGTGTAACGCTAGTGCTCGTAACGGATCGTTGAGC
TTCATTAAAACAATTATTATTCGAAATTTTGGATGCTTCAATCCTCTCAACTAGTCTTGGAATCCAAAGATAACGGAGTGTATCTTTGAATTGTT
TGCTATTCACATCGCACTTTAAGTTGTTTCCCATGTTTTTGAACTCGAGTTCCCCAGTAATTTTTAATCCCATTATCCGTTCTTCCCTGGCAAAT
GTTCCCCAATTTTTTGACA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E391551] SGN-U576248 Tomato 200607 Build 2 11 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T192877 [Download][View] Facility Assigned ID: FA0AAD4AE11FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: No vector sequence detected
Passed all screens and filters
Sequence Entropy: 0.892 Expected Error Rate: 0.0137 Quality Trim Threshold: 20.5