EST details — SGN-E391618

Search information 
Request: 391618Match: SGN-E391618
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C176529Clone name: TUS-24-C23
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C176529 is on microarray TOM1 spot ID 1-1-2.3.9.18 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C26943 [cLEF-42-A9] Trace: SGN-T60694 EST: SGN-E247650 Direction: 5' Facility: TIGR
Clone: SGN-C176529 [TUS-24-C23] Trace: SGN-T1407 EST: SGN-E378678 Direction: 5' Facility: Giov. Lab
Clone: SGN-C176529 [TUS-24-C23] Trace: SGN-T193178 EST: SGN-E391852 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E391618Length: 383 bp (820 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E391618 [] (trimmed) CGACGCTGCCGGTTCTCCGTTTACAGAAATCTCCATTGTTTCCAAGTGATTGTTGATTCGAACAGAGCTATGGTAGGAACAAGTGCAGTAATCGA
ATCGATGGGTTCAGCTGTTAATGGAAAGGAGGTGGCGGATGTTCGATTTGATCCGACGGCTGTAGTACCGGAGCTGGTGCCTGCAGTGGTGAAAT
CGGAAGTAGATGCGGCGGTTAATGGCGGTGGCCAGGAGCAGAAGAGGGAGATAGTGTTAGGGAGGAATATACATACGTCGTCCTTTTCTGTTACG
GAACCTGATGCGGATGATGATTCTACTGGTGATAAGGAAGCGTATATGGCTAATGTTCTAGCTCGGTATAGGAAGACTCTCACTGATCAAACTAA
GTA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E391618] SGN-U584469 Tomato 200607 Build 2 78 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T192944 [Download][View] Facility Assigned ID: FA0AAD12AB12RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.971 Expected Error Rate: 0.0067 Quality Trim Threshold: 14.5