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EST details — SGN-E391619

Search information 
Request: 391619Match: SGN-E391619
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C176555Clone name: TUS-24-E1
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C176555 is on microarray TOM1 spot ID 1-1-8.1.9.11 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C26985 [cLEF-42-D12] Trace: SGN-T60660 EST: SGN-E247616 Direction: 5' Facility: TIGR
Clone: SGN-C176555 [TUS-24-E1] Trace: SGN-T193179 EST: SGN-E391853 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E391619Length: 558 bp (854 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E391619 [] (trimmed) ATCCGGTGCTACTTTTCTGACCGGCGGTGGGTTGACGGTGACCGGAGACGGCGCGACGGTAGCGGCAGCGGCAGAGGCTCAGAGTAATAGATATG
GCGGAAGACAAGTATAATCTAAAAAATCCAGCGGTGAAGAGAATCTTACAGGAGGTTAAAGAGATGCAATCAAATCCTTCCGATGATTTCATGAG
CCTTCCTCTTGAGGAGAACATATTTGAATGGCAATTTGCAATCAGGGGTCCACGAGATTCTGAGTTTGAAGGGGGGATTTATCATGGACGAATTC
AGTTGCCAGCCGAATATCCTTTCAAGCCTCCTTCTTTCATGCTTTTGACACCAAATGGACGTTTTGAAACTCAAACCAAGATTTGTTTGAGTATT
TCTAATCATCATCCCGAGCACTGGCAACCGTGGGTGGGGGGGGGGCACTGCGTTGGTAGCTCTGATCGCATTTATGCCTACCAGCCCAAATGGTG
CCCTTGGATCACTAGAATACACAAAGGAAGAAAGGCGTGTTTTAGCTATTTAATCTCGTGATGTGGCTCCCAGATATGGGACT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E391619] SGN-U569768 Tomato 200607 Build 2 40 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T192945 [Download][View] Facility Assigned ID: FA0AAD12AC01RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.974 Expected Error Rate: 0.0072 Quality Trim Threshold: 14.5