EST details — SGN-E391654

Search information 
Request: 391654Match: SGN-E391654
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C176753Clone name: TUS-24-M7
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C176753 is on microarray TOM1 spot ID 1-1-2.1.9.13 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C27796 [cLEF-45-I7] Trace: SGN-T61244 EST: SGN-E246509 Direction: 5' Facility: TIGR
Clone: SGN-C176753 [TUS-24-M7] Trace: SGN-T193213 EST: SGN-E391887 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E391654Length: 523 bp (861 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E391654 [] (trimmed) AAGTAATTACAGTGTTCAGCCTTCTCTTTTGGGCGAACGTGCTGCTTCTGCACAATCAACTGCAATAATCCGGAAGGATCCGAATGATTCGTTTG
GCATAAACAAGCTTAATATTGATGATTCTATTCCTGCAGTTGCTGGGAAGCCTTCATCCAGTTTGCAGTTGTCACCGGGGTTGTCTTCATCAATG
AAGTCTACTCATCCCCAGGCATCGAGAGGCCAAGGAAGAGGATTTAATGCATCACCACATAGGAATTATCAATCGCCTGTGCGCAATAATCAAGT
CAATAGTGTTTCTCTGCCAACCCAGCTCCACCCTGCACAACGATATTCTGCTCAAAGTCGAGGACAACCTTTTCTGCAAGTAACTGGTCAGCAGT
TAGTACAGCAAACGGGTGCTGGATCTCAAGTTTCATCGTCCCCCCAAAACAGCACAAGTTATGAATACTTGTGAACCTGGAGAGCTTGCATTTAC
TTCAAAGTCCAATAAATTAACAAGTTCCGTGGTTGCAAAAGGGAAAGG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E391654] SGN-U584435 Tomato 200607 Build 2 16 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T192980 [Download][View] Facility Assigned ID: FA0AAD12AG04RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.979 Expected Error Rate: 0.0039 Quality Trim Threshold: 14.5