EST details — SGN-E391657

Search information 
Request: 391657Match: SGN-E391657
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C176759Clone name: TUS-24-M13
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C176759 is on microarray TOM1 spot ID 1-1-4.1.9.17 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C27816 [cLEF-45-J8] Trace: SGN-T61350 EST: SGN-E246615 Direction: 5' Facility: TIGR
Clone: SGN-C176759 [TUS-24-M13] Trace: SGN-T192984 EST: SGN-E391658 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E391657Length: 308 bp (918 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E391657 [] (trimmed) AAACCCAAATGAAATATATTATATATATATTGCACATGGATCTTGTCTATAAACAACTACACAAACACAGAAGGAAAACATATACTAGTATCTAC
CACCACCACACAGTGCAAGGTTATTTTCTGGCCTTGGGAATCAAAAGCAGCGGTTCTTTCTTTTGTAGTGTTACTCCAAACTGTTCAGTCATGTC
TAGCTCAACAGGACATTTTCCATGAGGAAGTTCCCAATCAAAGAAACGAACAAGTAAAGCAAGGACTAACGGAATTTCTATTGCAGCCATTGGCA
GGGCTGGGCATATTCTTCGCCCA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E391657] SGN-U569640 Tomato 200607 Build 2 8 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T192983 [Download][View] Facility Assigned ID: FA0AAD12AG07FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.956 Expected Error Rate: 0.0046 Quality Trim Threshold: 14.5