EST details — SGN-E391682

Search information 
Request: 391682Match: SGN-E391682
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C177694Clone name: TUS-27-D12
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C177694 is on microarray TOM1 spot ID 1-1-5.4.6.11 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C47596 [cLEI-16-L7] Trace: SGN-T83273 EST: SGN-E269049 Direction: 5' Facility: TIGR
Clone: SGN-C177694 [TUS-27-D12] Trace: SGN-T193256 EST: SGN-E391930 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E391682Length: 487 bp (864 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E391682 [] (trimmed) CAAAATTCAATCGGAGTTCAGATGGTGGGATCAAATCGATCAGTTTCTCCTTCTTGGAGCTGTTCCATTCCCATCGGATGTCCCTCGGTTGAAGC
AGCTTGGTGTTGGTGGTGTAATAACGCTGAATGAACCTTATGAAACTTTGGTACCGTCATCATTGTATCATGCCCATGGAATAGACCATCTCGTT
ATTCCAACCAGAGATTATCTTTTTGCACCCTCTTTCGTGGATATAAACCGAGCAGTAGATTTTATTCACAGGAATGCATCCTGTGGTCTGACTAC
TTATGTGCATTGCAAGGCCGGAAGGGGAAGGAGCACAACTGTTGTGCTTTGCTATTTGGTCGAATATAAGAATATGACTCCTGCTGCAGCGCTGG
AATATGTCCGTTCCAGAAGACCTAGAGTTCTATTGGCTCCTTCTCGGGGGAAGGCTGTTCAAGGATTCAAGCGGCATCGAATGGCAATCTTCTCC
ACTCTCTATTGA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E391682] SGN-U574421 Tomato 200607 Build 2 6 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T193008 [Download][View] Facility Assigned ID: FA0AAD15DB06RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.970 Expected Error Rate: 0.0052 Quality Trim Threshold: 14.5