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EST details — SGN-E391757

Search information 
Request: 391757Match: SGN-E391757
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C176660Clone name: TUS-24-I10
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C176660 is on microarray TOM1 spot ID 1-1-7.1.9.16 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C27202 [cLEF-42-N21] Trace: SGN-T60646 EST: SGN-E247602 Direction: 5' Facility: TIGR
Clone: SGN-C176660 [TUS-24-I10] Trace: SGN-T199142 EST: SGN-E397816 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E391757Length: 655 bp (863 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E391757 [] (trimmed) GAAATGTCGAATATGAAATCATTAATATCGACTATTGCATCCGTTACTGCAACAGCTATGCTTGTTCGAAGCATAGCTAGTGACTTTATCCCAAA
AGAATATCGTAGTTATGTCTTTGATAGCTTCCACAGCCTTTTTCATCGTTTCTCTTCGCAATTCACAATCTTGATTCATGAATTCCAGGGTCCGT
CTCCAAACCTCGTGTTCGAGGCAGTTGAGGTTTATTTAGGAAGTATAGTGAACTCTTCTACTAAGAGTATTCGATTAGGGAAGACGGAGAATGAC
AAAGGGCTAGTTATTACAATGGATAAAGACGAAGAGATCATCGATGTTTTTGAGGATGTTAAGGTGACATGGAGGATGGAATGTAGACGAATCGA
GTCAGGGAGCCAGAACGATGAGATAAAGGATATGATAGCTGCATTGTGTTCGGAGCTGAGATGTTATGAGTTGAAATTTCATAAGAAACATAAGG
AGAAGGTGATGAAATCGTATTTACCTTACATTATGGAGAGATCAAAAAACGCGAAAGAAGAATCCAGGGTTATAAAATTGTATTCTAATTTCAGG
AACTGGGGTTTCTGATGGAATGAATCTCAAAACATCCTATGACATTCGATACTCTAGCTATGGACGAACAGGTAAAAAACGCCTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E391757] SGN-U579496 Tomato 200607 Build 2 16 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T193083 [Download][View] Facility Assigned ID: FA0AAD12BE05RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.962 Expected Error Rate: 0.0036 Quality Trim Threshold: 14.5