EST details — SGN-E391883

Search information 
Request: 391883Match: SGN-E391883
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C176713Clone name: TUS-24-K15
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C176713 is on microarray TOM1 spot ID 1-1-2.3.9.16 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C27684 [cLEF-45-D14] Trace: SGN-T61493 EST: SGN-E246758 Direction: 5' Facility: TIGR
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Sequence 
Sequence Id: SGN-E391883Length: 638 bp (870 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E391883 [] (trimmed) AGTGAACTACACCAACTTTGGAATACAACAGCAGGTTGGATTTGAAGATATTACAACCAAAAACTCATTTTGAAACAAGTGAATAAACTCATCGA
CAAGGTCCTTAAACTCTTACAATGAAATACCATCACATAAAAAGGCAACTGATTGGTCTAAACTCAGTCATTGTTTTTTCCTGACAAAAAAAAGG
TATGTAAAACAATACCGAGTACATAGGATGTTGAAATGCAACACCAAAAATAAGAGTGGCAACCCTCTAAACAAAGAGAAAAATAGCGCAACCTA
TTAAATTCATCTCAAGTTCAACCTATCATTTTTAAGCAGTTGTAGCTGATTGAGCAGCCATCCTCTTGCGAGCCTCTTCAATGATAGATAACTTG
ATACCTTTACCCTTAGGTAGAGACACCCATGGCTTACTACCTTTACCAAGAGTGAACACATTTCCCAAACGGGTAGCAAACTCATGCCCCAGGGA
ATCCTGAATGTGAACTGTCTCAAAGCTACCCTTGTGCTTCTCCCTGTTCTTAAGAATTCCAACACGTCCCCTGTTTCTACCACCAGTCACCATAA
CCACATTACCAACATCAAACTTGATGAAGTCAACAATCTTATTGGAATCTAAATCCAGCTTGATGGTG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E391883] SGN-U579838 Tomato 200607 Build 2 128 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T193209 [Download][View] Facility Assigned ID: FA0AAD12AF08FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.957 Expected Error Rate: 0.0039 Quality Trim Threshold: 14.5