EST details — SGN-E391895

Search information 
Request: 391895Match: SGN-E391895
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C176797Clone name: TUS-24-O3
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C176797 is on microarray TOM1 spot ID 1-1-6.3.9.13 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C27898 [cLEF-45-O6] Trace: SGN-T61442 EST: SGN-E246707 Direction: 5' Facility: TIGR
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Sequence 
Sequence Id: SGN-E391895Length: 668 bp (831 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E391895 [] (trimmed) CTTCATAGGGTTTTTCTTCTTCCCCAAATTCATAAAATTCGTCTTCCAGATTCATGTGATTGCATTAGGGTTTTGAAAGATGCCGCAGAGACACT
CGAAGAACAACAACGATCTTGCCTTCTTTACGTACGATGAAAAGAGAAAGTTAGGGTATGGAACACAAAAGGAGAGGCTGGGAAAAGATTCAATC
AAGCCATTCGATGCTTGTTCCCTTTGTTTAAAACCCTTCATCGATCCGTTGTGTTGCCAGAAAGGGCATGTCTTTTGCAAAGAATGCATTCTAGA
ATGCCTTTTGTCCCAGAAAAAGGATATCCAAAGAAAGTTAGCTGCTCATACAGGTCAGCAGAAGCAAGAAAAAGAAGAGGAAGAGGAGAGGTTGA
TGCTGCAGAAAGCCAGGGATCTTGATGCATTTGATCGGGGGGATCATGGTCCAGTTCCGCAGTACAATGATAAGAACTACAACAGAGACAAAAAT
GGATTCCATGGAGCTAACAGTGTGAAAGCTACTTCTTATGAGGAGGAAGCACTTAGAACCATGAAAGCATTTTGGCTGCCCTCTGCAACACCAGA
TGCACCTGCTAAGGTGGAAGCCCCATCCACTAGCACAACTTGTCCTGAAGGGAGGGGAAAAAATTAAGATGAAAAACCTTTTCCCTATACACTTC
CCT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E391895] SGN-U568650 Tomato 200607 Build 2 24 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T193221 [Download][View] Facility Assigned ID: FA0AAD12AH02RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.959 Expected Error Rate: 0.0073 Quality Trim Threshold: 14.5