EST details — SGN-E391917

Search information 
Request: 391917Match: SGN-E391917
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C176576Clone name: TUS-24-E22
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C176576 is on microarray TOM1 spot ID 1-1-3.1.9.19 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C27038 [cLEF-42-F6] Trace: SGN-T60824 EST: SGN-E247780 Direction: 5' Facility: TIGR
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Sequence 
Sequence Id: SGN-E391917Length: 656 bp (807 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E391917 [] (trimmed) GTCATTCAAGCGACTACTAATCAGCAACCCGGATATGACATAATTGCACAGTTCATAATTGGTTATATCCTCCCAGGAAAACCAATTGCGAATTT
GCTTTTCAAAATCTATGGCCGGACTAGTACTGTTCATGCTCTCTCCTTTTTAGCTGATCTTAAACTTGGTCACTACATGAAAATTCCGCCACGAT
GCATGTACACAGCTCAGCTCGTGGGAACACTGGTTGCTGGTACAATCAACCTTGCTGTAGCATGGTGGATGCTAGGAAGCATCGATAACATTTGT
GACGTTGAAGCTCTTCATCCGGACAGCCCATGGACCTGTCCTAAATTCCGAGTGACATTTGATGCATCTGTGATATGGGGTCTAATTGGACCAGA
ACGGTTATTTGGTCCGGGAGGATTATATAGGAATTTGGTATGGTTATTCCTCATAGGTGCATTGCTACCGGTGCCTATTTGGGTGCTAAGCAAAA
TGTTCCCGGAAAAGAAATGGATTCCCTTGATCAACATACCTGTTATATCATATGGTTTCGCGGGAATGCCACCAGCAACACCAACAAATATAGCT
AGCTGGCTTATAACAGGTATGATATTCAACTATTTCGTGTTCAAATACAGAAAAGAGTGGTGGAAGAAATACAACTACGTTCTGTC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E391917] SGN-U585308 Tomato 200607 Build 2 10 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T193243 [Download][View] Facility Assigned ID: FA0AAD12BC11RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.977 Expected Error Rate: 0.0089 Quality Trim Threshold: 14.5