EST details — SGN-E391983
| Search information |
| Request: 391983 | Match: SGN-E391983 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C180309 | Clone name: TUS-34-A11 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C180309 is on microarray TOM1 spot ID 1-1-6.1.19.8 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C25873 [cLEF-2-B13] | Trace: SGN-T59140 | EST: SGN-E244857 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C180309 [TUS-34-A11] | Trace: SGN-T193310 | EST: SGN-E391984 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E391983 | Length: 172 bp (878 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E391983 [] (trimmed)
ATCCCCAAAAAAAAAAAAAGGGTTTTTTGCTAAAAAAAAACCCAGGTTTAAAATTTTGGGGGGGGAAAAACCCTTCCCAAAATAATTTAATTTCC
AAAAAAAAAAAAAAAAAAACTGGGGAAAGCGGGTGCTTTTTTGGAACCCAAAAGAGTTTTTTTCCCGGCCCCCCCAA
AAAAAAAAAAAAAAAAAAACTGGGGAAAGCGGGTGCTTTTTTGGAACCCAAAAGAGTTTTTTTCCCGGCCCCCCCAA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E391983] | SGN-U602217 | Tomato 200607 | Build 2 | 1 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T193309 [Download][View] | Facility Assigned ID: FA0AAD22AA06FM1 |
| Submitter: Koni | Sequencing Facility: INRA |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.811 | Expected Error Rate: 0.0418 | Quality Trim Threshold: 14.5 |
Working
