EST details — SGN-E392029

Search information 
Request: 392029Match: SGN-E392029
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C176800Clone name: TUS-24-O6
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C176800 is on microarray TOM1 spot ID 1-1-3.3.9.13 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C27905 [cLEF-45-P16] Trace: SGN-T61520 EST: SGN-E246785 Direction: 5' Facility: TIGR
Clone: SGN-C176800 [TUS-24-O6] Trace: SGN-T193107 EST: SGN-E391781 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E392029Length: 625 bp (852 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E392029 [] (trimmed) AATCAACAAATATTGCATTAATACAAGTTTAAATAGTCACATGGCTAATAAAGTTTTGACATAAATGGCCTGGTACAAATTTATTTTTTGGTTCT
TTAACTTACTGATCACAATGTTTACTGATCTTTAACTTACTTTTACTGGCATATTATTAACCACTTCCCAACTAAAATATCCCAACCAACTCCCA
CTCCTACGCGCCACCGTCAACAGTGGCCTTGTCGCCGGTTGAAACGTCGGCTCTCATTTTAAGCCACTCAACGACATCTCCGAACACTTGCTCCA
CATTCTCCTCCAGTTCTCCAACCAGCTGGTGCCACATACCTGGATATATCTTCAGTGTTTTGTCCTTGCTTGTCGATCGGCGATATAGCTCCTCC
GCGCACGCGGGATCGCAAATGACATCATCGCTGCCGTGGACGATCAAAAATGGTACTTTCACTTCTTCGAATCTCCCTTGCAGCTCCCTACATAC
TCTCATTAACTCACGCGCCGTCGCGGGGCGTGGTTTTATAAGTGGTCTCCTTGGACTTGCTATTGCCAATTTCCTCTTCCACTCCTCCTTGAATG
CAACCAAAGGCAACGAGCCGCGAGTGGGGACCACGGGCCAAGTCGGAATCAAAAC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E392029] SGN-U566786 Tomato 200607 Build 2 49 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T193355 [Download][View] Facility Assigned ID: FA0AAD12BH03FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.973 Expected Error Rate: 0.0048 Quality Trim Threshold: 14.5